DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)73Ah and bmi1a

DIOPT Version :10

Sequence 1:NP_524933.1 Gene:l(3)73Ah / 48903 FlyBaseID:FBgn0002283 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_073796118.1 Gene:bmi1a / 321505 ZFINID:ZDB-GENE-030131-224 Length:381 Species:Danio rerio


Alignment Length:229 Identity:87/229 - (37%)
Similarity:130/229 - (56%) Gaps:21/229 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHLEEKKTCPTCDNIIHQSHPLQYIS 68
            |:|:..:|||:.|.:||||||||||:.||||:|||.|:|::||..|.||.||..:|::.||..|.
Zfish    67 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIR 131

  Fly    69 FDRTMQDIVYKLVPKLQEDESRRERDFYKSRNMPCPKDITQNHEDDNE------------KVMDA 121
            .|:|:|||||||||.|.::|.:|.||||...  |.......::||..|            :::..
Zfish   132 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAEH--PSVDAANGSNEDRGEVADEDKRIITDDEIISL 194

  Fly   122 HAESDFHRLDEQVNVCLECISNNFKNLQRRFIRCSSQATITHLKKLVAKKILNGIEKYREIDILC 186
            ..|...||..:|  .|.|.......| .:|:::|.:..|:.||:|.:..|:  .|....:|:::.
Zfish   195 SIEFFDHRAQQQ--GCTEERQKEEVN-NKRYLQCPAAMTVMHLRKFLRSKM--DIPPTYQIEVMY 254

  Fly   187 NEELLGKDHTL-KFVYVTRWRFRDPPLRLQFRPR 219
            .:|.|...:|| ...|:..|| |:.||.|::|.|
Zfish   255 EDEPLKDYYTLMDIAYIYTWR-RNGPLPLKYRVR 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)73AhNP_524933.1 RING_Ubox 4..96 CDD:473075 52/91 (57%)
RAWUL_PCGF3 133..217 CDD:340603 24/84 (29%)
bmi1aXP_073796118.1 None

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