Protein Alignment l(3)73Ah and Pcgf6

DIOPT Version :10

• Sequence 1: NP_524933.1
• Gene: l(3)73Ah / 48903
• FlyBaseID: FBgn0002283
• Length: 222
• Species: Drosophila melanogaster
• Sequence 2: XP_008758660.1
• Gene: Pcgf6 / 309457
• RGDID: 1306904
• Length: 365
• Species: Rattus norvegicus
• Alignment Length: 220
• Identity: 87/220 - (39%)
• Similarity: 125/220 - (56%)
• Gaps: 28/220 - (12%)

  Fly     2 ERRVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHLEEKKTCPTCDNIIHQSHPLQY 66
            ||.:.|..:.|:|.|.||.||.|||||:|||||||||||:|:|......||.|:.::||:.||..
  Rat   121 ERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYN 185

  Fly    67 ISFDRTMQDIVYKLVPKLQEDESRRERDFYKSRNMPCPKD---------ITQNHEDDNEKVMDAH 122
            |..||.:||||||||..|:|.|.::..||||.|.:..||.         :.|.......:...|
  Rat   186 IRLDRQLQDIVYKLVVNLEEREKKQMHDFYKERGLEVPKPASLFPSQIAVPQPVPASKGRTKKA- 249

  Fly   123 AESDFH---RLDEQVNVCLECISNN-----------FKNLQRRFIRCSSQATITHLKKLVAKKIL 173
            .||.|.   .||  |::.||.|..|           |:.|:::|:|.|.:|||.|::|.:.:|:
  Rat   250 LESVFRIPPELD--VSLLLEFIGANEDTGHFKHSLRFEPLEKKFVRVSGEATIGHVEKFLRRKM- 311

  Fly   174 NGIEKYREIDILCNEELLGKDHTLK 198
             |::...::||:|.:.||.:..||:
  Rat   312 -GLDPACQVDIICGDHLLERYQTLR 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(3)73Ah	NP_524933.1	RING_Ubox	4..96	CDD:473075	48/91 (53%)
		RAWUL_PCGF3	133..217	CDD:340603	24/77 (31%)
Pcgf6	XP_008758660.1	RING-HC_PCGF6	126..184	CDD:438396	32/57 (56%)
		COG5222	<135..258	CDD:227547	56/123 (46%)
		RAWUL_PCGF6	261..356	CDD:340605	25/79 (32%)