DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)73Ah and pcgf5

DIOPT Version :10

Sequence 1:NP_524933.1 Gene:l(3)73Ah / 48903 FlyBaseID:FBgn0002283 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_012822233.1 Gene:pcgf5 / 101734913 XenbaseID:XB-GENE-962043 Length:260 Species:Xenopus tropicalis


Alignment Length:267 Identity:101/267 - (37%)
Similarity:154/267 - (57%) Gaps:59/267 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ERRVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHLEEKKTCPTCDNIIHQSHPLQY 66
            :||..:|..||||||.||.||.|..||||||||||||:|:|:|.||...||.|.|.:|:::||:.
 Frog     4 QRRRFVKEFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEESNDCPKCGNQVHETNPLEM 68

  Fly    67 ISFDRTMQDIVYKLVPKLQEDESRRERDFYKSR----------NMPCPKDITQNHEDDNEKVMDA 121
            :..|.|:::|::||||.|:|.|..||.:|:|.:          |:..|::..:.::||.      
 Frog    69 LRLDNTLEEIIFKLVPGLREGEQNRELEFWKRKQPHENGDDGVNVKRPREDEEENDDDR------ 127

  Fly   122 HAESDFHRLDEQVNVCLECISNN-------FKNLQRRFIRCSSQATITHLKKLVAKKILNGIEKY 179
                |:||.|.|:.:||:|:.||       .|.|.::|||||::.|:..:||.::.|:  .:...
 Frog   128 ----DYHRSDPQIAICLDCLRNNSQSGDNIVKGLMKKFIRCSTRVTVGTIKKFLSLKL--KLPST 186

  Fly   180 REIDILCNEELLGKDHTLKFVYVTRWRFRDP------------------------------PLRL 214
            .|:|:|||.|::|||||::|:|:||||.|..                              |:.|
 Frog   187 YELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFQYQKSSTSLHMSLTETARGVSEASTISYPMVL 251

  Fly   215 QFRPRVE 221
            |:|||::
 Frog   252 QYRPRID 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)73AhNP_524933.1 RING_Ubox 4..96 CDD:473075 49/91 (54%)
RAWUL_PCGF3 133..217 CDD:340603 38/120 (32%)
pcgf5XP_012822233.1 RING-HC_PCGF5 6..100 CDD:438395 50/93 (54%)
RAWUL_PCGF5 133..260 CDD:340604 42/128 (33%)

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