DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and cbpA

DIOPT Version :10

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_415520.1 Gene:cbpA / 947572 ECOCYCID:EG12193 Length:306 Species:Escherichia coli


Alignment Length:394 Identity:111/394 - (28%)
Similarity:165/394 - (41%) Gaps:107/394 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 KDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREYDT 128
            |||||.:||....:.|.||.||.:||:|||||.:|| |||..:|:||:||:|||||||:|.||| 
E. coli     4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRRAEYD- 66

  Fly   129 YGQTAENIGRQGGGFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIF--GEG-NFRTNSFDDFA 190
                                         |.||.|:  ||:  |.:.|  |:| :|....|||..
E. coli    67 -----------------------------QMWQHRN--DPQ--FNRQFHHGDGQSFNAEDFDDIF 98

  Fly   191 DSKFGFGQAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGTGFETV 255
            .|.||....|...     ..|.||.:.::.|.|..:                          ||:
E. coli    99 SSIFGQHARQSRQ-----RPATRGHDIEIEVAVFLE--------------------------ETL 132

  Fly   256 STGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQR--RKVTVPVPAGIENGQTVRMQVG---- 314
            :.              .::.|.|........|...|.  :.:.|.:|||:.|||.:|:: |    
E. coli   133 TE--------------HKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLK-GQGTP 182

  Fly   315 ------SKELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYEDQWINVEPGTSS 373
                  :.:|::...:.....|...|.|:.....:|..:|.||..|.|..:.|...:.:.||:.:
E. coli   183 GENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQA 247

  Fly   374 HHKIMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALIEAYAELEEDTPGQIHGIANRK 438
            ..::.::||||  |:....||.|..:||.:|  .|.|:...||.:..|:.:.       ....||
E. coli   248 GQRLRVKGKGL--VSKKQTGDLYAVLKIVMP--PKPDENTAALWQQLADAQS-------SFDPRK 301

  Fly   439 DGSK 442
            |..|
E. coli   302 DWGK 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 djlA <9..117 CDD:236512 30/52 (58%)
DnaJ_bact 65..424 CDD:274090 106/373 (28%)
cbpANP_415520.1 PRK10266 1..306 CDD:182347 111/394 (28%)

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