DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and YDJ1

DIOPT Version :9

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_014335.1 Gene:YDJ1 / 855661 SGDID:S000005008 Length:409 Species:Saccharomyces cerevisiae


Alignment Length:444 Identity:131/444 - (29%)
Similarity:190/444 - (42%) Gaps:80/444 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREYDTYG 130
            :|..|||...|...:|||||.:.|.|||||.|..: :|..||:|.|.|||:|||.:||..||.:|
Yeast     7 FYDILGVPVTATDVEIKKAYRKCALKYHPDKNPSE-EAAEKFKEASAAYEILSDPEKRDIYDQFG 70

  Fly   131 QTAENIGRQGGGFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIFGEGNF-RTNSFDDFADSKF 194
            :...:.....|||||||. |||                :::|.:.||.|.. |........|.|.
Yeast    71 EDGLSGAGGAGGFPGGGF-GFG----------------DDIFSQFFGAGGAQRPRGPQRGKDIKH 118

  Fly   195 GFGQAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPG---RCQYCNGTG--FET 254
            ....:.|.:.....|:.|  :||.:      .|.:|.|.    |.|.|   :|..|||.|  |.|
Yeast   119 EISASLEELYKGRTAKLA--LNKQI------LCKECEGR----GGKKGAVKKCTSCNGQGIKFVT 171

  Fly   255 VSTGPFVMR--STCRYCQGTRQHI--KYPCSECEGKGRTVQRRKVTVPVPAGIENGQTVRMQ--- 312
            ...||.:.|  :.|..|.||...|  |..|..|.||....:|:.:.|.|..|:::||.:..:   
Yeast   172 RQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEA 236

  Fly   313 -------VGSKELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYEDQWINV--- 367
                   .|.....|:.|..:|  |:|:|.|:..:|.|.|..|:.||...::.|..| |:.|   
Yeast   237 DQAPDVIPGDVVFIVSERPHKS--FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGD-WLKVGIV 298

  Fly   368 -----EPGTSSHHKIMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALIEAYAELEEDT 427
                 .||.    :.::.|||:......|:|:  :.:|.|:    |..:......|...:|||..
Yeast   299 PGEVIAPGM----RKVIEGKGMPIPKYGGYGN--LIIKFTI----KFPENHFTSEENLKKLEEIL 353

  Fly   428 PGQIHGIANRKDGSKQATAG----ASEEPGAGAAAKASAAAAGSGASKPGPGAE 477
            |.:|....     .|:||..    |..:|......:||...|...:.:...|.|
Yeast   354 PPRIVPAI-----PKKATVDECVLADFDPAKYNRTRASRGGANYDSDEEEQGGE 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 121/398 (30%)
DnaJ 65..127 CDD:278647 30/60 (50%)
DnaJ_zf 227..287 CDD:199908 25/68 (37%)
DnaJ_C 288..409 CDD:199909 33/138 (24%)
YDJ1NP_014335.1 DnaJ 2..368 CDD:223560 124/408 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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