DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and GFA2

DIOPT Version :10

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_568690.1 Gene:GFA2 / 834854 AraportID:AT5G48030 Length:456 Species:Arabidopsis thaliana


Alignment Length:455 Identity:159/455 - (34%)
Similarity:238/455 - (52%) Gaps:73/455 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RRCLAAA-----AFSTPRAT---SYRIL-SSAGS---------------------GSTRADAPQV 52
            ||||:::     |....|..   |||.| :|.|:                     |....:....
plant    15 RRCLSSSLIQDLANQKLRGVCIGSYRRLNTSVGNHANVIGDYASKSGHDRKWINFGGFNTNFGST 79

  Fly    53 RRLHTTRD--LLAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYE 115
            |..|.|..  :.|||||:.|||:|||...:||||||.||||.|||.||:||:|..||||||:|||
plant    80 RSFHGTGSSFMSAKDYYSVLGVSKNAQEGEIKKAYYGLAKKLHPDMNKDDPEAETKFQEVSKAYE 144

  Fly   116 VLSDEQKRREYDTYGQTAENIGRQGG-----GFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKI 175
            :|.|::||..||..|..|......||     ||.|||.|||               :|.::|   
plant   145 ILKDKEKRDLYDQVGHEAFEQNASGGFPNDQGFGGGGGGGF---------------NPFDIF--- 191

  Fly   176 FGEGNFRTNSFDDFADSKFGFGQAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTK 240
               |:|..:.|:.:... .| ||..::::||:|.:|.:|.:|.|.......|..|.|....||||
plant   192 ---GSFNGDIFNMYRQD-IG-GQDVKVLLDLSFMEAVQGCSKTVTFQTEMACNTCGGQGVPPGTK 251

  Fly   241 PGRCQYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRK-VTVPVPAGIE 304
            ..:|:.|||:|..::..|...:::||:.|.|..|.....|..|.| .|.|:.:| |.|.:..|::
plant   252 REKCKACNGSGMTSLRRGMLSIQTTCQKCGGAGQTFSSICKSCRG-ARVVRGQKSVKVTIDPGVD 315

  Fly   305 NGQTVRM-QVGSK--------ELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVY 360
            |..|::: :||..        :|:||.:|.....|||||:|:|.||.:|:.||:||||::|..:.
plant   316 NSDTLKVARVGGADPEGDQPGDLYVTLKVREDPVFRREGSDIHVDAVLSVTQAILGGTIQVPTLT 380

  Fly   361 EDQWINVEPGTSSHHKIMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALIEAYAELEE 425
            .|..:.|.|||...||::||.||::...:...||.|||..:::|:  .:.:::..|:|.:::.|:
plant   381 GDVVVKVRPGTQPGHKVVLRNKGIRARKSTKFGDQYVHFNVSIPA--NITQRQRELLEEFSKAEQ 443

  Fly   426  425
            plant   444  443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 djlA <9..117 CDD:236512 54/130 (42%)
DnaJ_bact 65..424 CDD:274090 140/373 (38%)
GFA2NP_568690.1 DnaJ_bact 94..442 CDD:274090 140/373 (38%)

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