DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and AT3G17830

DIOPT Version :10

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_188410.2 Gene:AT3G17830 / 821051 AraportID:AT3G17830 Length:517 Species:Arabidopsis thaliana


Alignment Length:483 Identity:138/483 - (28%)
Similarity:213/483 - (44%) Gaps:82/483 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LPAVRRCLAAAA----------FSTPRATSY---------RILSSAGSGSTRADAPQVRRLHTTR 59
            :.|:.||....:          |..|.|:.|         |:.....||..|      ||:.|. 
plant     1 MAAMARCALIPSINPAHSFRHQFPQPNASFYLPPTLPIFSRVRRFGISGGYR------RRVITM- 58

  Fly    60 DLLAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRR 124
             ....|:|:||.|.:||..::||.:|.:||:|||||.|| :|.|..||:::|.||||||||:||.
plant    59 -AAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNK-NPGAEDKFKQISAAYEVLSDEEKRS 121

  Fly   125 EYDTYGQTAENIGRQGGGFPGGGAGGFGPEG-FSQSWQFRSSIDPEELFRKIFGEGNFRTNSFDD 188
            .||.:|:.                   |.|| |:.|......:||.:|:...||..:.......:
plant   122 AYDRFGEA-------------------GLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGMGE 167

  Fly   189 FADSKFGFGQAQEMVMD------LTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYC 247
            .....|.|...:.:.:|      |:|.:|..||.:::.|:.::.|..|.||..:......:|..|
plant   168 SGGMGFDFMNKRSLDLDIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNSIKQCSSC 232

  Fly   248 NGTG----FETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGIENGQT 308
            :|.|    .:....|.....|||..|.|..:.|...|.:|.|.||...|:|:.|.||.|:.:..|
plant   233 DGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKMDVVVPPGVSDRAT 297

  Fly   309 VRMQVGSK---------ELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYEDQW 364
            :|:|....         :||:..:|:.....||||.:::::..|....|:||.|.:|:.|.....
plant   298 MRIQGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTDAILGATTKVETVEGSMD 362

  Fly   365 INVEPGTSSHHKIMLRGKGLKRVNAHG-HGDHYVHVKITVPSAKKLDKKRLALIEAYAELEEDTP 428
            :.:.|||.....:.|..||:...:... .|||...|||::|  |||.::...|:|.::.|     
plant   363 LRIPPGTQPGDTVKLPRKGVPDTDRPSIRGDHCFVVKISIP--KKLSERERKLVEEFSSL----- 420

  Fly   429 GQIHGIANRKDGSKQATAGASEEPGAGA 456
                   .|...|...|....||...|:
plant   421 -------RRSSSSTGPTETRQEEQSFGS 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 djlA <9..117 CDD:236512 41/121 (34%)
DnaJ_bact 65..424 CDD:274090 117/379 (31%)
AT3G17830NP_188410.2 DnaJ_bact 63..417 CDD:274090 117/375 (31%)

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