DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5504 and dnaja1

DIOPT Version :9

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001011012.1 Gene:dnaja1 / 496421 XenbaseID:XB-GENE-976936 Length:400 Species:Xenopus tropicalis


Alignment Length:404 Identity:103/404 - (25%)
Similarity:165/404 - (40%) Gaps:99/404 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREYDTYG 130
            ||..|||..|:...::||||.:||.|||||.|   |:.|.||:::|:|||||||.:||..||..|
 Frog     7 YYDILGVKPNSTPDELKKAYRKLALKYHPDKN---PNEGEKFKQISQAYEVLSDSKKRDLYDKGG 68

  Fly   131 QTAENIGRQGGGFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIFGEGNFRTNSFDDFADSKFG 195
            :.|...|..|||            ||:         .|.::|...||.|                
 Frog    69 EQAIKEGGMGGG------------GFA---------SPMDIFDMFFGGG---------------- 96

  Fly   196 FGQAQE--------MVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGR---CQYCNG 249
             |:.|.        ..:.::......|..:.:.|.....|.||.|.    |.|.|.   |..|.|
 Frog    97 -GRMQRERRGKNVVHQLSVSLEDLYNGATRKLAVQKNTICDKCEGR----GGKKGAVECCPNCRG 156

  Fly   250 TGFE--TVSTGPFV---MRSTCRYCQGTRQHI--KYPCSECEGKGRTVQRRKVTVPVPAGIENGQ 307
            ||.:  ....||.:   ::|.|..|||..:.|  |..|..|.|:....:::.:.|.:..|:::||
 Frog   157 TGMQIRIHQLGPGMVQQIQSVCPECQGQGERINPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQ 221

  Fly   308 TVR----------MQVGSKELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYED 362
            .:.          ::.|  ::.:....:....|.|...|:.....|.|.:|:.|        ::.
 Frog   222 KITFSGEGDQEPGLEAG--DIIIVLDQKDHSVFTRRNEDLIIHMEIELVEALCG--------FQK 276

  Fly   363 QWINVEPGT---SSHHKIMLRGKGLKRVNAHG---------HGDHYVHVKITVPSAKKLDKKRLA 415
            ..:.::..|   :||...:::...:|.|...|         .|...|..::..|::..:...:|.
 Frog   277 PIVTLDSRTIIITSHPGQIVKHGDVKCVLNEGMPIYRRPYDKGRLIVQFQVNFPASNSISPDKLP 341

  Fly   416 LIE----AYAELEE 425
            |:|    |..|:||
 Frog   342 LLEKLLPARKEIEE 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 103/404 (25%)
DnaJ 65..127 CDD:278647 32/60 (53%)
DnaJ_zf 227..287 CDD:199908 24/69 (35%)
DnaJ_C 288..409 CDD:199909 21/142 (15%)
dnaja1NP_001011012.1 PTZ00037 7..397 CDD:240236 103/404 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.