DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and CG8476

DIOPT Version :10

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_731777.1 Gene:CG8476 / 41624 FlyBaseID:FBgn0038127 Length:242 Species:Drosophila melanogaster


Alignment Length:188 Identity:45/188 - (23%)
Similarity:72/188 - (38%) Gaps:63/188 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RILSSAGSGSTRADAPQVRRLHTTRDLLAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKE 99
            |.|::.||..|....|.       ..|.|:::|..|.|...::.::||:|:.:|:||||||.|.:
  Fly    14 RCLATFGSRFTYQSQPM-------SQLRAENHYQVLNVPVGSSDREIKRAFIELSKKYHPDANSQ 71

  Fly   100 DPDAGRKFQEVSEAYEVL---------------SDEQK---------RREYDTYGQ-----TAEN 135
            ..|: ..|.::.|||:.|               .::.|         ||.|..:.|     .::.
  Fly    72 TRDS-EVFMKICEAYQTLHRVNSRQIYDSRLRMQNQNKSPQESTFTGRRVYTVWSQYQSAVRSKQ 135

  Fly   136 IGRQGGGFPGGGAGGFGP---------------------EGFSQSWQFRSSIDPEELF 172
            :||....|     ||..|                     ||..:||..:.|.....:|
  Fly   136 MGRGSRRF-----GGVKPTIFKGKIVSKWLPMTLVDLKREGLRRSWHDKYSFPNSPIF 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 djlA <9..117 CDD:236512 27/81 (33%)
DnaJ_bact 65..424 CDD:274090 37/158 (23%)
CG8476NP_731777.1 DnaJ 37..98 CDD:395170 20/61 (33%)

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