DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and Dnaja3

DIOPT Version :9

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001033684.2 Gene:Dnaja3 / 360481 RGDID:1306527 Length:480 Species:Rattus norvegicus


Alignment Length:535 Identity:228/535 - (42%)
Similarity:305/535 - (57%) Gaps:116/535 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CKKLFVFRQLPAVRRCLAAAAFST----PRA-------------TSYRILSSAGSGSTRADAPQV 52
            |:||           |::|...|.    |||             .|:..:.:|.           
  Rat    40 CRKL-----------CVSAFGLSMGAHGPRALLTLRPGVRLTGTKSFPFVCTAS----------- 82

  Fly    53 RRLHTTRDLLAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVL 117
              .||:..|...|||..|||.:||:.||||||||||||||||||||:||.|..||.:::||||||
  Rat    83 --FHTSASLAKDDYYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVL 145

  Fly   118 SDEQKRREYDTYGQTAENIGRQGGGF-PGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIFGEGNF 181
            |||.||::||.||         ..|| ||..:.|   :|:   |:...|:||||||||||||  |
  Rat   146 SDEVKRKQYDAYG---------SAGFDPGASSSG---QGY---WRGGPSVDPEELFRKIFGE--F 193

  Fly   182 RTNSFDDFADSKFGFGQAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQY 246
            .::.|.||.:.   |.|.||.:|:|||.|||:||||:..||::|.|.:|.|...|||||...|.|
  Rat   194 SSSPFGDFQNV---FDQPQEYIMELTFNQAAKGVNKEFTVNIMDTCERCDGKGNEPGTKVQHCHY 255

  Fly   247 CNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGIENGQTVRM 311
            |:|:|.||::|||||||||||.|.|....|..||..|.|.|:..|:::||||||||:|:||||||
  Rat   256 CSGSGMETINTGPFVMRSTCRRCGGRGSIITNPCVVCRGAGQAKQKKRVTVPVPAGVEDGQTVRM 320

  Fly   312 QVGSKELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYEDQWINVEPGTSSHHK 376
            .||.:|:||||||::|..|||:|||:|:|..||:|||:||||.:.||:||...:.:..|..:..|
  Rat   321 PVGKREIFVTFRVQKSPVFRRDGADIHSDLFISIAQAILGGTAKAQGLYETINVTIPAGIQTDQK 385

  Fly   377 IMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALIEAYAELEEDTPGQIHGIANRKDGS 441
            |.|.|||:.|:|::|:||||:|:||.||  |:|..::..||.:|||.|.|..|.::|:.:...|.
  Rat   386 IRLTGKGIPRINSYGYGDHYIHIKIRVP--KRLSSRQQNLILSYAEDETDVEGTVNGVTHTSTGG 448

  Fly   442 K--QATAGASEEPGAGAAAKASAAAAGSGASKPGPGAEKSEGKDQWTDNEKTKAKEGGGSGSGQG 504
            :  .::.|:.:...||                              .|||               
  Rat   449 RTMDSSTGSKDRREAG------------------------------EDNE--------------- 468

  Fly   505 DGGGGGFISKIKSMF 519
                 ||:||:|.:|
  Rat   469 -----GFLSKLKKIF 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 201/374 (54%)
DnaJ 65..127 CDD:278647 44/61 (72%)
DnaJ_zf 227..287 CDD:199908 33/59 (56%)
DnaJ_C 288..409 CDD:199909 67/120 (56%)
Dnaja3NP_001033684.2 DnaJ 90..480 CDD:223560 214/461 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341683
Domainoid 1 1.000 258 1.000 Domainoid score I1939
eggNOG 1 0.900 - - E2759_KOG0715
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36170
Inparanoid 1 1.050 413 1.000 Inparanoid score I1787
OMA 1 1.010 - - QHG53632
OrthoDB 1 1.010 - - D436402at33208
OrthoFinder 1 1.000 - - FOG0001676
OrthoInspector 1 1.000 - - oto96521
orthoMCL 1 0.900 - - OOG6_100469
Panther 1 1.100 - - LDO PTHR44145
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2075
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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