DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and dnaja3a

DIOPT Version :9

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_005168528.1 Gene:dnaja3a / 335894 ZFINID:ZDB-GENE-030131-7837 Length:475 Species:Danio rerio


Alignment Length:537 Identity:235/537 - (43%)
Similarity:303/537 - (56%) Gaps:109/537 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RCLAAAAFST---------PRAT-SYR----------------ILSSAG-----SGSTRADAPQV 52
            |.::||..|:         |||. :||                :...||     ||.|...:..|
Zfish    11 RWISAAVSSSHSRACSPFIPRADGAYRGFKSLSGRQMWTTRGGLSGGAGAAVTLSGMTAIGSSHV 75

  Fly    53 ---RRLHTTRDLLAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAY 114
               ...||:.....:|:|..|||.::|..|:|||||||:|||||||||||||.|..||.:::|||
Zfish    76 VCKMSFHTSAPSRKQDFYQILGVPRSATQKEIKKAYYQMAKKYHPDTNKEDPQAKEKFAQLAEAY 140

  Fly   115 EVLSDEQKRREYDTYGQTAENIGRQGGGFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIFGEG 179
            ||||||.||::|||||         ..||..|.||.    |..|.|...:|||||||||||||| 
Zfish   141 EVLSDEVKRKQYDTYG---------SAGFDAGRAGA----GHQQYWGGGTSIDPEELFRKIFGE- 191

  Fly   180 NFRTNSFDDFADSKFGFGQAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRC 244
               .:....|.|....|.|.||.||:|||||||:||||::.||:...|.:|.|...|||:|...|
Zfish   192 ---FSGAQGFGDFNAIFNQPQEYVMELTFAQAAKGVNKEITVNIEGTCQRCDGRGHEPGSKVQHC 253

  Fly   245 QYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGIENGQTV 309
            ..|||||.|||:|||||||||||.|.|....|..||..|.|.|:|.||:.||||||||||:||||
Zfish   254 GNCNGTGMETVNTGPFVMRSTCRRCGGRGSVITSPCIACRGTGQTKQRKTVTVPVPAGIEDGQTV 318

  Fly   310 RMQVGSKELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYEDQWINVEPGTSSH 374
            ||.||.||:|:||:|::|..|||:|||:|:|..||:|||:||||:|.||:||...:::..||.:.
Zfish   319 RMPVGKKEIFITFKVQKSPIFRRDGADIHSDVMISVAQAILGGTIRAQGLYETINLSIPVGTQTD 383

  Fly   375 HKIMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALIEAYAELEEDTPGQIHGIANRKD 439
            .:|.|.|||:.||:.:|:||||||:||.:|  |.|..::.||:.:|||.|.|..|.::|:     
Zfish   384 QRIRLSGKGIPRVSGYGYGDHYVHIKIKIP--KMLTDRQRALMMSYAEDESDVEGTVNGV----- 441

  Fly   440 GSKQATAGASEEPGAGAAAKASAAAAGSGASKPGPG-AEKSEGKDQWTDNEKTKAKEGGGSGSGQ 503
                                 ::..||.|:::.|.| .||.|                       
Zfish   442 ---------------------TSTTAGGGSNQTGTGHTEKDE----------------------- 462

  Fly   504 GDGGGGGFISKIKSMFN 520
                  |..||:|.||:
Zfish   463 ------GIFSKLKKMFS 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 204/373 (55%)
DnaJ 65..127 CDD:278647 41/61 (67%)
DnaJ_zf 227..287 CDD:199908 34/59 (58%)
DnaJ_C 288..409 CDD:199909 70/120 (58%)
dnaja3aXP_005168528.1 DnaJ 89..474 CDD:223560 218/459 (47%)
DnaJ 91..153 CDD:278647 41/61 (67%)
DnaJ_C 207..416 CDD:199909 123/210 (59%)
DnaJ_zf 236..296 CDD:199908 34/59 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581698
Domainoid 1 1.000 260 1.000 Domainoid score I1936
eggNOG 1 0.900 - - E2759_KOG0715
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36170
Inparanoid 1 1.050 411 1.000 Inparanoid score I1831
OMA 1 1.010 - - QHG53632
OrthoDB 1 1.010 - - D436402at33208
OrthoFinder 1 1.000 - - FOG0001676
OrthoInspector 1 1.000 - - otm26102
orthoMCL 1 0.900 - - OOG6_100469
Panther 1 1.100 - - LDO PTHR44145
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R701
SonicParanoid 1 1.000 - - X2075
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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