DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and CG2887

DIOPT Version :9

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_572633.1 Gene:CG2887 / 31978 FlyBaseID:FBgn0030207 Length:342 Species:Drosophila melanogaster


Alignment Length:381 Identity:105/381 - (27%)
Similarity:152/381 - (39%) Gaps:90/381 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREY 126
            :.||||..||:.:.||..:|:|||::.|.:||||.|| .|.|...|::|::|||||||::||..|
  Fly     1 MPKDYYKILGIQRTANDGEIRKAYHKQALRYHPDKNK-SPQAEEIFKQVAKAYEVLSDKKKRGSY 64

  Fly   127 DTYGQ--TAENIGRQGGGFP--------GGGAG---GFGPEGFSQSWQFRSSIDPEELFRKIFGE 178
            |:...  |..|...||.||.        |||:|   |.|..|..|:       :|...|.:.|..
  Fly    65 DSRNDKGTRRNTANQGSGFGDGTAFGSCGGGSGSGSGGGSGGGRQN-------NPRANFGRFFDN 122

  Fly   179 G-NFRT------NSFDDFADSKFGFGQAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCE 236
            . ::.|      |.||...|...|.|..                           .||   .:||
  Fly   123 SESYSTFFEDIENDFDSDDDVLLGGGAG---------------------------APK---RRCE 157

  Fly   237 PGTKPGRCQYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRT--VQ-RRKVTVP 298
            ..:.....::......|.::.|          | ..|..|    |...|:...  || .|.:||.
  Fly   158 QQSPQSSIEHVIYVALEDIANG----------C-NRRMKI----SRASGRNGVDGVQYDRILTVK 207

  Fly   299 VPAGIENGQTV-----RMQVGSKE----LFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTV 354
            :|.|.:.|..:     .:|:.:.|    :|: .|.:....|||:|.::...|.|||..|:.|..|
  Fly   208 IPPGCKAGTKICFPNEGIQLPNLEPANVVFI-IRDKPHPIFRRDGNNLLYTAEISLKDALCGLHV 271

  Fly   355 RVQGVY-EDQWINVEPGTSSHHKIMLR--GKGL-KRVNAHGHGDHYVHVKITVPSA 406
            .|..:. ....:..:.|.....|.:.|  |.|| ..:|....|...|...|..|.|
  Fly   272 MVPTLLGRPMELKTDVGEVISPKSVRRILGYGLPDSINNSRRGSIVVRFSIQFPDA 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 105/380 (28%)
DnaJ 65..127 CDD:278647 31/61 (51%)
DnaJ_zf 227..287 CDD:199908 11/59 (19%)
DnaJ_C 288..409 CDD:199909 36/135 (27%)
CG2887NP_572633.1 DnaJ 1..331 CDD:223560 105/381 (28%)
DnaJ 4..65 CDD:278647 31/61 (51%)
DnaJ_C 163..326 CDD:199909 41/178 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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