DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5504 and Dnajb12

DIOPT Version :9

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001013929.1 Gene:Dnajb12 / 294513 RGDID:1359677 Length:378 Species:Rattus norvegicus


Alignment Length:186 Identity:61/186 - (32%)
Similarity:93/186 - (50%) Gaps:30/186 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 STPRATSYRILSSA-----GSGSTRA-DAPQVRRLHTTRDLLAKDYYATLGVAKNANGKDIKKAY 85
            :|.|.||.....||     |..||:. .:.||..:...:.  .||||..|||:::|:.:|:||||
  Rat    69 TTTRKTSGTETPSANGEAGGGESTKGYTSEQVAAVKRVKQ--CKDYYEILGVSRSASDEDLKKAY 131

  Fly    86 YQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREYDTYGQTAENIGRQG---GGFPGGG 147
            .:||.|:|||.| ..|.|...|:.:..||.|||:.:||::||.:|.......|.|   |.|..| 
  Rat   132 RKLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDDKNQAARHGHSHGDFHRG- 194

  Fly   148 AGGFGPEGFSQSWQFRSSIDPEELFRKIFGEGNFRTNSFDDFADS--KFGFGQAQE 201
                          |.:.|.||:||...|| |.|.:::...:::.  ::.:.|.|:
  Rat   195 --------------FEADISPEDLFNMFFG-GGFPSSNVHVYSNGRMRYTYQQRQD 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 50/144 (35%)
DnaJ 65..127 CDD:278647 29/61 (48%)
DnaJ_zf 227..287 CDD:199908
DnaJ_C 288..409 CDD:199909
Dnajb12NP_001013929.1 DnaJ 111..172 CDD:278647 29/61 (48%)
DUF1977 269..369 CDD:286411
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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