DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5504 and dnj-10

DIOPT Version :9

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_498902.1 Gene:dnj-10 / 176211 WormBaseID:WBGene00001028 Length:456 Species:Caenorhabditis elegans


Alignment Length:512 Identity:222/512 - (43%)
Similarity:296/512 - (57%) Gaps:76/512 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VFRQLPAVRRCLAAAAFSTPRATSYRILSSAGSGSTRADAPQVRRLHTTRDLLAKDYYATLGVAK 74
            :.|.:|.:      |..|||..::.::                .:||||..|..:|||.||||.|
 Worm    11 IHRSVPLL------AQVSTPTTSTTKL----------------AQLHTTHALSKEDYYKTLGVDK 53

  Fly    75 NANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREYDTYGQTAENIGRQ 139
            .::.|.|||||:|||||||||.|| ..:|..||||:|||||||||:.||:|||.||         
 Worm    54 KSDAKAIKKAYFQLAKKYHPDVNK-TKEAQTKFQEISEAYEVLSDDTKRQEYDAYG--------- 108

  Fly   140 GGGFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIFGEGNFRTN-SFDDFADSKFGFGQAQEMV 203
            .||.|.||.||.|  ||    ....::|..|:||:.||.|..... :||:||.|.||...|||||
 Worm   109 SGGGPAGGRGGAG--GF----HHHGNVDVNEIFRRAFGGGGGMGGFNFDNFAQSAFGHSAAQEMV 167

  Fly   204 MDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGTGFETVS---TGPFVMRST 265
            ||::|.:|.||..|:|:||||:.|.||.||:.|||.|...|.||||||  .||   .|.|..::|
 Worm   168 MDISFEEAVRGATKNVSVNVVEDCLKCHGTQVEPGHKKTSCPYCNGTG--AVSQRLQGGFFYQTT 230

  Fly   266 CRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGIENGQTVRMQVGSKELFVTFRVERSDYF 330
            |..|:|:..:.|.||.||||:|:|||||:|:..||||..||.:::.|||..:|||.|.|..|..|
 Worm   231 CNRCRGSGHYNKNPCQECEGEGQTVQRRQVSFNVPAGTNNGDSLKFQVGKNQLFVRFNVAPSLKF 295

  Fly   331 RREGADVHTDAAISLAQAVLGGTVRVQGVYEDQWINVEPGTSSHHKIMLRGKGLKRVNAHGHGDH 395
            |||..|:|.|..||||||||||||:|.|:..|.::::..||.||.|:.|.|||:||::::|:||.
 Worm   296 RREKDDIHCDVDISLAQAVLGGTVKVPGINGDTYVHIPAGTGSHTKMRLTGKGVKRLHSYGNGDQ 360

  Fly   396 YVHVKITVPSAKKLDKKRLALIEAYAELEEDTPGQIHGI-ANRKDGSKQATAGASEEPGAGAAAK 459
            |:|:|:|||.....::|::.|  |:|..|:...|.|.|: .|:|...|:..  .:||       |
 Worm   361 YMHIKVTVPKYLTAEQKQIML--AWAATEQLKDGTIKGLEKNQKTEEKETK--KNEE-------K 414

  Fly   460 ASAAAAGSGASKPGPGAEKSEGKDQWTDNEKTKAKEGGGSGSGQGDGGGGGFISKIK 516
            .|..|:.|...:..|.||.:|..|:..:||                    ||..|||
 Worm   415 KSEGASESQKRRSEPVAENAETIDENQENE--------------------GFFEKIK 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 190/378 (50%)
DnaJ 65..127 CDD:278647 42/61 (69%)
DnaJ_zf 227..287 CDD:199908 31/62 (50%)
DnaJ_C 288..409 CDD:199909 63/120 (53%)
dnj-10NP_498902.1 DnaJ 41..387 CDD:223560 186/365 (51%)
DnaJ 44..105 CDD:278647 42/61 (69%)
DnaJ_C 165..372 CDD:199909 110/208 (53%)
DnaJ_zf 191..252 CDD:199908 31/62 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159786
Domainoid 1 1.000 227 1.000 Domainoid score I1425
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 372 1.000 Inparanoid score I1220
Isobase 1 0.950 - 0 Normalized mean entropy S1730
OMA 1 1.010 - - QHG53632
OrthoDB 1 1.010 - - D436402at33208
OrthoFinder 1 1.000 - - FOG0001676
OrthoInspector 1 1.000 - - oto17772
orthoMCL 1 0.900 - - OOG6_100469
Panther 1 1.100 - - LDO PTHR44145
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R701
SonicParanoid 1 1.000 - - X2075
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.890

Return to query results.
Submit another query.