DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5504 and dnj-27

DIOPT Version :9

Sequence 1:NP_995932.1 Gene:CG5504 / 48844 FlyBaseID:FBgn0002174 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001040704.1 Gene:dnj-27 / 173065 WormBaseID:WBGene00001045 Length:788 Species:Caenorhabditis elegans


Alignment Length:228 Identity:64/228 - (28%)
Similarity:105/228 - (46%) Gaps:53/228 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LLAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRRE 125
            ::|:|||..|||.::|:.:.|:||:.:||.|.|||.|.:||:|..:|.::::|||||.||..|::
 Worm    16 VIAEDYYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPNAHDEFVKINKAYEVLKDENLRKK 80

  Fly   126 YDTYGQTAENIGRQGGGFPGGGAGGFGPEGFSQSWQFRSS-----IDPEEL-------FRKIFGE 178
            ||.:|:.....|.|||             ...|||||.:.     .|.:|:       |:::..:
 Worm    81 YDQFGEKGLEDGFQGG-------------NNYQSWQFYNDNFGIYDDDQEIVTLNRADFQRMVSD 132

  Fly   179 GN--FRTNSFDDFADSKFGFGQAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKP 241
            .|  :..|.:..:.      ....::..  |:.:.||.:...:.|..|:    ||       ..|
 Worm   133 SNEIWFINFYSTYC------SHCHQLAP--TWRKFAREIEGTIRVGAVN----CA-------EDP 178

  Fly   242 GRCQYCNGTGFETVSTGP-FVMRSTCRYCQGTR 273
            ..||      .:.|:..| .|...|..:.||.|
 Worm   179 QLCQ------SQRVNAYPSLVFYPTGEFYQGHR 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5504NP_995932.1 DnaJ 63..437 CDD:223560 64/226 (28%)
DnaJ 65..127 CDD:278647 29/61 (48%)
DnaJ_zf 227..287 CDD:199908 12/48 (25%)
DnaJ_C 288..409 CDD:199909
dnj-27NP_001040704.1 DnaJ 18..>150 CDD:223560 47/150 (31%)
DnaJ 20..82 CDD:278647 29/61 (48%)
PDI_a_ERdj5_N 116..214 CDD:239301 21/115 (18%)
Thioredoxin_like 222..>312 CDD:294274
ER_PDI_fam 438..750 CDD:273457
PDI_a_ERdj5_C 438..543 CDD:239302
PDI_a_ERdj5_C 549..664 CDD:239302
PDI_a_ERdj5_C 670..773 CDD:239302
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.