DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP2A2 and PMR1

DIOPT Version :10

Sequence 1:NP_733765.1 Gene:ATP2A2 / 488 HGNCID:812 Length:1042 Species:Homo sapiens
Sequence 2:NP_011348.1 Gene:PMR1 / 852709 SGDID:S000003135 Length:950 Species:Saccharomyces cerevisiae


Alignment Length:1016 Identity:318/1016 - (31%)
Similarity:513/1016 - (50%) Gaps:151/1016 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     6 TKTVEEVLGHFGVNESTGL-SLEQVKKLKERWGSNELPAEEGKTLLELVIEQF-EDLLVRILLLA 68
            |.:|:|.|.....:::.|| |..:....:..:|.||:..|:.::|.:..:..| ||.::.:|:.:
Yeast    40 TLSVDEALEKLDTDKNGGLRSSNEANNRRSLYGPNEITVEDDESLFKKFLSNFIEDRMILLLIGS 104

Human    69 ACISFVLAWFEEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALKEYEPEMGKVYRQD 133
            |.:|..:...::......|.   |:::       .||..||..:|.::|||.:..|....:.|..
Yeast   105 AVVSLFMGNIDDAVSITLAI---FIVV-------TVGFVQEYRSEKSLEALNKLVPAECHLMRCG 159

Human   134 RKSVQRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPV---- 194
            ::|  .:.|..:||||:|...:||::|||||:  |::..|.:|:|.||||:..|.|.:..:    
Yeast   160 QES--HVLASTLVPGDLVHFRIGDRIPADIRI--IEAIDLSIDESNLTGENEPVHKTSQTIEKSS 220

Human   195 ----PDPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEMVATEQERTPLQQKLDE 255
                |:......::..:.:.||.:..|...|:||.||.||..|.:.:.|...|:.:||||..:|:
Yeast   221 FNDQPNSIVPISERSCIAYMGTLVKEGHGKGIVVGTGTNTSFGAVFEMMNNIEKPKTPLQLTMDK 285

Human   256 FGEQLSKVISLICIAVWIINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLA 320
            .|:.||.|..::...:.::.|      :.|.||:.    .|:|:|:|||||||||||.::|..||
Yeast   286 LGKDLSLVSFIVIGMICLVGI------IQGRSWLE----MFQISVSLAVAAIPEGLPIIVTVTLA 340

Human   321 LGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFILDRVEGDTCSLNEFTIT 385
            ||..||||:.||||.||||||||..:|||||||||||:|.|:|.:::.||.:..   .||..:: 
Yeast   341 LGVLRMAKRKAIVRRLPSVETLGSVNVICSDKTGTLTSNHMTVSKLWCLDSMSN---KLNVLSL- 401

Human   386 GSTYAPIGEVHKDDKPVNCHQYDGLV----ELATICALCNDSALDYNEAKGVYEKVGEATETALT 446
                    :.:|..|..|.:..:.|.    |..||..|||:::  :::...::  :|..|:.|| 
Yeast   402 --------DKNKKTKNSNGNLKNYLTEDVRETLTIGNLCNNAS--FSQEHAIF--LGNPTDVAL- 453

Human   447 CLVEKMNVFDTELKGLSKIERANACNSVIKQLMKKEFTLEFSRDRKSMSV--------YCTPNKP 503
                        |:.|:..|..:..|:|     :|...|.|:..||.|:.        .||    
Yeast   454 ------------LEQLANFEMPDIRNTV-----QKVQELPFNSKRKLMATKILNPVDNKCT---- 497

Human   504 SRTSMSKMFVKGAPEGVIDRCTHIRVGSTKVPMTSGVKQKIMSVIREWGS--GSDTLRCLALATH 566
                   ::||||.|.:::..|...  .:|...|..:.:...:.|.|..:  .|:.||....|  
Yeast   498 -------VYVKGAFERILEYSTSYL--KSKGKKTEKLTEAQKATINECANSMASEGLRVFGFA-- 551

Human   567 DNPLRREEMHLEDSA-----NFIKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGD 626
                   ::.|.||:     :.||   :|||.|.:||.||||..|..:::...|.|:.:||||||
Yeast   552 -------KLTLSDSSTPLTEDLIK---DLTFTGLIGMNDPPRPNVKFAIEQLLQGGVHIIMITGD 606

Human   627 NKGTAVAICRRIGIFGQDEDVTSKAFTGREFDELNPSAQRDACLNARCFARVEPSHKSKIVEFLQ 691
            ::.|||.|.::|||...|..::  ..:|.:.||::.....:...:...|||..|.||..||..|:
Yeast   607 SENTAVNIAKQIGIPVIDPKLS--VLSGDKLDEMSDDQLANVIDHVNIFARATPEHKLNIVRALR 669

Human   692 SFDEITAMTGDGVNDAPALKKAEIGIAMGS-GTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNN 755
            ...::.||||||||||||||.::||::||. ||.|||.||:|||.||:||||:.|:|||:.|:||
Yeast   670 KRGDVVAMTGDGVNDAPALKLSDIGVSMGRIGTDVAKEASDMVLTDDDFSTILTAIEEGKGIFNN 734

Human   756 MKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPP 820
            ::.|:.:.:|::|..:..:.|:.|...|..|..:|:||:|::.||.||.:||..|.|.::|.|||
Yeast   735 IQNFLTFQLSTSVAALSLVALSTAFKLPNPLNAMQILWINILMDGPPAQSLGVEPVDHEVMKKPP 799

Human   821 RNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFI---AADGGPRVSFYQLSHFLQCKEDNPDF 882
            |...:.:::..:..|.|.....:...||    :.|:   |.||               |....| 
Yeast   800 RKRTDKILTHDVMKRLLTTAACIIVGTV----YIFVKEMAEDG---------------KVTARD- 844

Human   883 EGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLIL 947
                         .||..:..|..:|.|||......:|:..:..:.|.....::.||:......:
Yeast   845 -------------TTMTFTCFVFFDMFNALACRHNTKSIFEIGFFTNKMFNYAVGLSLLGQMCAI 896

Human   948 YVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVAR 988
            |:.....||:...|.::..|::|.||..|.::||..|...|
Yeast   897 YIPFFQSIFKTEKLGISDILLLLLISSSVFIVDELRKLWTR 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP2A2NP_733765.1 P-type_ATPase_SERCA 5..988 CDD:319778 317/1014 (31%)
Interaction with HAX1. /evidence=ECO:0000269|PubMed:18971376 575..594 8/23 (35%)
Interaction with PLN. /evidence=ECO:0000250|UniProtKB:P04191 787..807 8/19 (42%)
Interaction with TMEM64 and PDIA3. /evidence=ECO:0000250|UniProtKB:O55143 788..1042 51/204 (25%)
Interaction with PLN. /evidence=ECO:0000250|UniProtKB:P04191 931..942 2/10 (20%)
PMR1NP_011348.1 ATPase-IIA2_Ca 35..940 CDD:130585 318/1016 (31%)

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