DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP2A2 and cta3

DIOPT Version :10

Sequence 1:NP_733765.1 Gene:ATP2A2 / 488 HGNCID:812 Length:1042 Species:Homo sapiens
Sequence 2:NP_595246.1 Gene:cta3 / 2541204 PomBaseID:SPBC839.06 Length:1037 Species:Schizosaccharomyces pombe


Alignment Length:1084 Identity:329/1084 - (30%)
Similarity:501/1084 - (46%) Gaps:190/1084 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     9 VEEVLGHFGVNESTGLSLEQVKKLKERWGSNELPAEEGKTLLELVIEQFEDLLVRILLLAACISF 73
            :::|...|..:...||:.|:.:.....:|.|.|.|:.|.:..::::.|..:.:..:|:|||.:||
pombe    15 IKDVESEFLTSIPNGLTHEEAQNRLSEYGENRLEADSGVSAWKVLLRQVLNAMCVVLILAAALSF 79

Human    74 -VLAWFEEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALKEYEPEMGKVYRQDRKSV 137
             ...|.|.|           ||..|:|.|..||..||..||..:::|:.....|..|.|..:  .
pombe    80 GTTDWIEGG-----------VISAIIVLNITVGFIQEYKAEKTMDSLRTLASPMAHVTRSSK--T 131

Human   138 QRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQ 202
            ..|.:..:||||:|.:..||.||||:||  :::.....|:::|||||:.|||      |..|..|
pombe   132 DAIDSHLLVPGDVVVLKTGDVVPADLRL--VETVNFETDEALLTGESLPVIK------DAHATFQ 188

Human   203 --------DKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKI------------RDEMVATEQER- 246
                    |:.|:.:|.:.:..|:|.|:..|||:.|:||.|            |.|.......| 
pombe   189 MNEDVPIGDRINLAYSSSIVTKGRAKGICYATGMQTQIGAIAAGLRQKGKLFQRPEKDEPNYRRK 253

Human   247 ----------------------TPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHGGSWI 289
                                  ||||:||......|..:..::.|.|...:..|..:.|      
pombe   254 LNKYYLKVTSYYVQRVLGLNVGTPLQRKLTVLAYILFCIAIILAIIVMAAHSFHVTNEV------ 312

Human   290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTG 354
              :||    |::|.::.|||.|.||::..:|:|.:.|:|:..|||.|.::|.||..:.|||||||
pombe   313 --SIY----AISLGISIIPESLIAVLSITMAMGQKNMSKRRVIVRKLEALEALGGVTDICSDKTG 371

Human   355 TLTTNQMSVCRMFI--LDRVEGDTCSLNEFTI--TGSTYAPIGEVHKDDK-------PVNCHQYD 408
            |:|..:|...|::|  ...:..||...|..||  .....|.:.:|.|:.|       |.| ...|
pombe   372 TITQGKMITRRVWIPSYGYLSVDTSDANNPTIGTVSGLEAAMQDVLKEKKQEMKNIDPSN-QPSD 435

Human   409 GLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKIERANACNS 473
            ..:.|...|||||.|.::..|. |.:...||.||.||....::.|....:|              
pombe   436 QFIPLLKTCALCNLSTVNQTET-GEWVVKGEPTEIALHVFSKRFNYGKEDL-------------- 485

Human   474 VIKQLMKKEFTLE--FSRDRKSMSVYCTPNKPSRTSMSKMFVKGAPEGVIDRCTHIRVGSTKVPM 536
                |....|..|  |..:.|.|:|.....:...|    ::.|||.|.:::||      ||....
pombe   486 ----LKTNTFVREYPFDSEIKRMAVIYEDQQGQYT----VYAKGAVERILERC------STSNGS 536

Human   537 TSGVKQKIMSVIREWGSGSDTLRCLALATH-----DNPLRREEMHLEDSANFIKYETNLTFVGCV 596
            |.....:.:.:.:.....::.||.|||||.     ||    .|....|.|     |::|.||..|
pombe   537 TLEEPDRELIIAQMETLAAEGLRVLALATKVIDKADN----WETLPRDVA-----ESSLEFVSLV 592

Human   597 GMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIF-----GQDEDVTSKAFTGRE 656
            |:.||||.|...:|:||.:|||||.|:|||:..||.||.|.:||.     .:|.:::....||.:
pombe   593 GIYDPPRTESKGAVELCHRAGIRVHMLTGDHPETAKAIAREVGIIPPFISDRDPNMSWMVMTGSQ 657

Human   657 FDELNPSAQRDACLNARC--FARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAM 719
            ||.|  |.:....|.|.|  .||..|..|.|::|.|.......|||||||||:|:||:|.:||||
pombe   658 FDAL--SDEEVDSLKALCLVIARCAPQTKVKMIEALHRRKAFVAMTGDGVNDSPSLKQANVGIAM 720

Human   720 G-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFP 783
            | :|:.|||.||::||.|||||:||.|:||||.:::|:.:|:.:|:.||||||  |.|...|.|.
pombe   721 GQNGSDVAKDASDIVLTDDNFSSIVNAIEEGRRMFDNIMRFVLHLLVSNVGEV--ILLVVGLAFR 783

Human   784 E-------ALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGC 841
            :       .:.||::||.|::|...|:..||......|:|.:.|.:.|..:....|....:..|.
pombe   784 DEVHLSVFPMSPVEILWCNMITSSFPSMGLGMELAQPDVMERLPHDNKVGIFQKSLIVDMMVYGF 848

Human   842 YVGAATVGAAAWWFIA-ADGGPRVSFYQLSHF-LQCKEDNPDFEGVDCAIFESPYPMTMALSVLV 904
            ::|  .|....|..|. ..|...:|:...:|: ..|.    |......|:|.   .:|..: :::
pombe   849 FLG--VVSLMTWVVIMYGFGTGNLSYDCNAHYHAGCN----DVFKARSAVFA---VVTFCI-LIM 903

Human   905 TIEMCNALNSLSENQSLLRMPPW-------------ENIWLVGSICLSMSLHFLILYVEPLPLI- 955
            .:|:.|..|||.....:    ||             ||.:|..:|.|:....|..:|:   |:| 
pombe   904 AVEVKNFDNSLFNLHGI----PWGEWNFRYFLHTLVENKFLAWAIALAAVSVFPTIYI---PVIN 961

Human   956 ---FQITPLNVTQWLMVLKISLPVILMDETLKFVARNYLEPGKE 996
               |:.|.:. .:|.:|....:......|..|.:.|:...|.|:
pombe   962 RDVFKHTYIG-WEWGVVAVAVMFYFFYVEIWKSIRRSLTNPQKK 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP2A2NP_733765.1 P-type_ATPase_SERCA 5..988 CDD:319778 326/1074 (30%)
Interaction with HAX1. /evidence=ECO:0000269|PubMed:18971376 575..594 5/18 (28%)
Interaction with PLN. /evidence=ECO:0000250|UniProtKB:P04191 787..807 7/19 (37%)
Interaction with TMEM64 and PDIA3. /evidence=ECO:0000250|UniProtKB:O55143 788..1042 52/228 (23%)
Interaction with PLN. /evidence=ECO:0000250|UniProtKB:P04191 931..942 3/10 (30%)
cta3NP_595246.1 ATPase-IID_K-Na 5..1003 CDD:130586 328/1081 (30%)

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