DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wek and CG4282

DIOPT Version :9

Sequence 1:NP_001260472.1 Gene:wek / 48785 FlyBaseID:FBgn0001990 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster


Alignment Length:555 Identity:116/555 - (20%)
Similarity:188/555 - (33%) Gaps:135/555 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CRLCARD------DVVYKVRERDDDL--VRIISKCFDVEMTLEEPELGSMLCEECYSVIGQLITF 68
            |.||..:      |.:.....|.|.|  ..|:::.|.|:::.|..|   .:|..|:.::....|.
  Fly     7 CLLCMCEYPAMMGDYIDVHSARGDQLEVTTIVNQHFPVQISKESDE---RICGRCWKIVSDFHTL 68

  Fly    69 SDSVSKVQAIFELLRHSEPQDSQDLDALRLEYGLPP-----ACKQDLEFLDIDDTEDRCSLVEEL 128
            .:.||..|:..:..:.:..:|    |.|..|....|     |.:::....:..:...|.....|:
  Fly    69 HEFVSAAQSSLQETKVALMED----DPLTQETTSFPEIIKLATQEEEGVTEPQELGGRNFFYPEI 129

  Fly   129 TISDHSTSPSPDFE--AQTVRTRANLKQCNSDPKVLASPTASIPEVETKRSRRQQFAAKRNSKVY 191
            .|.:|.....|..|  .::..|:.|..|...                ..|..|::..|:..|.| 
  Fly   130 KIEEHELDTLPRIEILERSANTQENQDQLEG----------------AARRLRKRLKAEDGSSV- 177

  Fly   192 TATESDDEEAILDEDEAVSPPPLKRKRGRPKGSG-----------------KQKNVDD------- 232
              .:..||:.:   :|...|.|.|::||||:.|.                 |.:.:|:       
  Fly   178 --DKDKDEDGV---EETAEPAPPKKRRGRPRKSDAAVAPPQKPKEDIQLDLKAEELDEFVDEETD 237

  Fly   233 --------SDNVTSREPDDNAKSKQDDKTSELS--------------------------MSPHGS 263
                    |||  |.|.|..:.....|...||.                          ..|...
  Fly   238 PDFSCLVPSDN--SSEDDGGSDGFDSDSDFELDNGKQEFAVLPKRTVVRPKKYKKRTKPAEPKVR 300

  Fly   264 QSSNFVD--------------------YPCKICNETFMSFMALRRHKHDMHG-GPKKYVCDHCGK 307
            .|...::                    .||.|||....:|..::||....|. .|...:|  ||:
  Fly   301 MSRELLEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLTHQVDPGYMMC--CGR 363

  Fly   308 GLKTFTSLVEHQLVHTEEKPCICPVCNAGFKNKARLRVHSQTHGEP----KFECNVCGKKLQTRA 368
            .......|.||.|||.......|.||...|:|...|..|.|.|.:|    .|.|::|.|...::.
  Fly   364 KFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKT 428

  Fly   369 ILNKH---KYVHTDERRFKCEVCGSGCKNSTALKIHLLG-HTGLRPYVCKYCGKAFASNTNCRSH 429
            .::.|   |:|...|.:|.|..|.........||.|:.. |......:|..|||...:....:.|
  Fly   429 AIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKH 493

  Fly   430 KWKKHPELASKEDETESSRVPVPTLEELRAITREM 464
            :...|.:....|.|.:..::....|:.:..:.:.|
  Fly   494 QELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHM 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wekNP_001260472.1 zf-AD 11..80 CDD:214871 18/75 (24%)
C2H2 Zn finger 273..294 CDD:275368 7/20 (35%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 5/22 (23%)
C2H2 Zn finger 385..405 CDD:275368 5/20 (25%)
zf-H2C2_2 397..422 CDD:290200 8/25 (32%)
C2H2 Zn finger 413..429 CDD:275368 4/15 (27%)
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 18/76 (24%)
FYDLN_acid <191..268 CDD:302856 18/78 (23%)
C2H2 Zn finger 330..351 CDD:275368 7/20 (35%)
C2H2 Zn finger 360..378 CDD:275368 7/19 (37%)
LIM 361..>400 CDD:295319 13/38 (34%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
zf-C2H2_8 389..465 CDD:292531 21/75 (28%)
C2H2 Zn finger 417..438 CDD:275368 4/20 (20%)
C2H2 Zn finger 448..465 CDD:275368 4/16 (25%)
C2H2 Zn finger 477..498 CDD:275368 5/20 (25%)
C2H2 Zn finger 511..532 CDD:275368 2/18 (11%)
C2H2 Zn finger 541..562 CDD:275368
C2H2 Zn finger 570..590 CDD:275368
C2H2 Zn finger 598..619 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471726
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.