DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wek and CG8388

DIOPT Version :10

Sequence 1:NP_524930.1 Gene:wek / 48785 FlyBaseID:FBgn0001990 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster


Alignment Length:569 Identity:121/569 - (21%)
Similarity:197/569 - (34%) Gaps:177/569 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CRLCAR--DDVVYKVR---ERDDDL-VR-IISKCFDVEMTLEEPELGSMLCEECYSVIGQLITFS 69
            |.||.:  ||....:.   |..|.| :| ||.|.|.::  :.:.:....:|..|:.   ||:.|.
  Fly     3 CFLCTQTVDDAAGNIEFASEEADSLGLRCIIEKHFWLQ--IPDSKRAGYVCGPCWE---QLLLFH 62

  Fly    70 DSVSKVQAIFELLRHSEPQDSQDLDALRLEYGLPPACKQDLEFLDIDDTEDRCSLVEELTISDHS 134
            :....|:           |..:.|:...|:...||.....             :|.|.:..|:|.
  Fly    63 NFYLNVE-----------QAHKALEQTVLKETSPPEVVAS-------------ALEEHIVKSEHD 103

  Fly   135 TSPSPDFEAQTVRTR------------ANLKQCNSDPKVLASPTASIPEVETKRSRRQQFAAKRN 187
            .|.:...:.:..|.|            :.|:|.|.:...:..|.|.:...:....:.:|.....:
  Fly   104 DSVAAAVKRRRGRPRKVAQQDAREELKSVLEQINLNEIKIEFPEADLTIADVLEDQEEQDFLPDD 168

  Fly   188 SKVYTATESDDEEAILDEDEAVSPPPLKRK-RGRPKGSGK---------------QKNVDDSDNV 236
            .   .:.|..::..:|::    .||.|||| .||.:|..:               ||:.:.:|.:
  Fly   169 C---ISKEGAEDPEVLEK----KPPTLKRKVSGRSRGRRRVQLAERPNTSCLPKIQKSQEFNDYI 226

  Fly   237 ------------------------TSREPD-------------------DNAKSKQDDKT----- 253
                                    ..||..                   |:.:..||.:|     
  Fly   227 REHYKVQCHICNLPMEDFSEMLAHVRREHKQRGYAMCCNRKFLKRGVLVDHLRRHQDPETFKCSI 291

  Fly   254 ----------SELSMSPHGSQSSNFVDYPCKICNETFMSFMALRRHKHDMHGGPK---KYVCDHC 305
                      .||.|..|..:|...: |.|:.|::.|.|.:...|||  :...|:   |..|.||
  Fly   292 CGRVMGHRRSLELHMRMHEIKSRGRL-YRCEQCSKAFYSAVVYERHK--LTHIPREQWKVPCTHC 353

  Fly   306 GKGLKTFTSLVEH-QLVHTEEKPCICPVCNAGFKNKARLRVHSQTH-GEPK--FECNVCGKKLQT 366
            .|...:..::.:| :|||......||.||....:.:..|..|.:.| |.|:  .:|::|...|.|
  Fly   354 EKTYPSQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALARHMEEHTGGPQAAIKCHLCDSMLTT 418

  Fly   367 RAILNKH--------------------------------KYVHTDERRFKCEVCGSGCKNSTALK 399
            :..|.:|                                ||.|...|..:|.:|....|....||
  Fly   419 KYGLARHIKMMHTAENLQPMQCEFCLKICPSLQAHQHHIKYTHNTARSHQCPMCEKAFKRPNELK 483

  Fly   400 IHLLGHTGLRPYVCKYCGKAFASNTNCRSHKWKKHPELASKEDETESSR 448
            .|:..|||...|.|.:|.:.|.||.|..:|:.|.|      ..|.|.:|
  Fly   484 EHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVH------RKEWEENR 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wekNP_524930.1 zf-AD 11..80 CDD:462262 19/74 (26%)
SFP1 <226..346 CDD:227516 37/196 (19%)
C2H2 Zn finger 273..294 CDD:275368 7/20 (35%)
C2H2 Zn finger 302..322 CDD:275368 6/20 (30%)
SFP1 <320..401 CDD:227516 27/115 (23%)
C2H2 Zn finger 330..350 CDD:275368 5/19 (26%)
C2H2 Zn finger 357..377 CDD:275368 8/51 (16%)
SFP1 <379..434 CDD:227516 19/54 (35%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
C2H2 Zn finger 413..429 CDD:275368 6/15 (40%)
CG8388NP_611075.1 zf-AD 3..78 CDD:462262 21/90 (23%)
C2H2 Zn finger 264..281 CDD:275368 1/16 (6%)
C2H2 Zn finger 289..309 CDD:275368 3/19 (16%)
C2H2 Zn finger 320..340 CDD:275368 7/21 (33%)
C2H2 Zn finger 350..369 CDD:275368 5/18 (28%)
C2H2 Zn finger 440..461 CDD:275368 2/20 (10%)
C2H2 Zn finger 469..489 CDD:275368 6/19 (32%)
C2H2 Zn finger 497..515 CDD:275368 7/17 (41%)

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