DRSC/TRiP Functional Genomics Resources

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Protein Alignment wek and let-391

DIOPT Version :9

Sequence 1:NP_001260472.1 Gene:wek / 48785 FlyBaseID:FBgn0001990 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_491744.3 Gene:let-391 / 182953 WormBaseID:WBGene00006492 Length:453 Species:Caenorhabditis elegans


Alignment Length:368 Identity:64/368 - (17%)
Similarity:108/368 - (29%) Gaps:157/368 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 DDEEAILDEDEAVSPPPLKRKRGRPKGSGKQKNVDDSDNVTSREPDDNAKSKQDDKTSELSMSPH 261
            ::.:||.:|..|...|            ..||..::.:.:. :.||...:.|:            
 Worm     9 ENSDAIFEEWAAECTP------------DAQKEHEELEEIV-KIPDSTYRKKK------------ 48

  Fly   262 GSQSSNFVDYPCKICNETFMSFMALRRHKHDMHGGPKKYVCDHCGKGLKTFTSLVEH-QLVHTEE 325
            |:|....|. .|::|.........:..|.. .|.|.|.|.||.||......|.::.| ::.|..:
 Worm    49 GNQKLPTVT-TCEVCGVALKYPSRIMEHMR-THTGEKPYECDICGMRFTQRTPMINHFRVQHMGD 111

  Fly   326 KPCICPV-CNAGFKNKARLRVHSQTHG-------------------------------------- 351
            .|.:|.. |...|.|.:|...|..:|.                                      
 Worm   112 LPFLCNFGCGKRFVNNSRRTAHELSHNGLKRAGPARPYLKPVKKIVCPSMDMDILSNSALANYIS 176

  Fly   352 ----------------------------------------------------------------- 351
                                                                             
 Worm   177 PPTIDSIFQSDPSTSSSSPSQFQSSNQTTKQSIYPSEKEMEKAAISNARIDDVINTVLARVLAPI 241

  Fly   352 -------EPK----------------FECNVCGKKLQTRAILNKHKYVHTDERRFKCEVCGSGCK 393
                   ||:                .:||:||..|:..:.:..|...||.|:.|:|..||....
 Worm   242 DEEIPIEEPEKAPQKRAYISNRRATLAQCNICGLMLKHPSKIADHIRTHTGEKPFECGECGLSLS 306

  Fly   394 NSTALKIHLLG-HTGLRPYVCKY-CGKAFASNTNCRSHKWKKH 434
            .:::||:|:.. |||.||:.|.: ||.:|.:::..:.|:...|
 Worm   307 KASSLKVHIRRMHTGERPFECTWRCGLSFVTDSVRKEHEMTVH 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wekNP_001260472.1 zf-AD 11..80 CDD:214871
C2H2 Zn finger 273..294 CDD:275368 3/20 (15%)
C2H2 Zn finger 302..322 CDD:275368 6/20 (30%)
C2H2 Zn finger 330..350 CDD:275368 6/20 (30%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..405 CDD:275368 6/20 (30%)
zf-H2C2_2 397..422 CDD:290200 12/26 (46%)
C2H2 Zn finger 413..429 CDD:275368 4/16 (25%)
let-391NP_491744.3 C2H2 Zn finger 59..79 CDD:275368 3/20 (15%)
zf-H2C2_2 73..96 CDD:290200 9/23 (39%)
C2H2 Zn finger 87..108 CDD:275368 6/20 (30%)
C2H2 Zn finger 116..137 CDD:275368 6/20 (30%)
C2H2 Zn finger 270..290 CDD:275368 6/19 (32%)
zf-H2C2_2 286..304 CDD:290200 8/17 (47%)
C2H2 Zn finger 298..319 CDD:275368 6/20 (30%)
C2H2 Zn finger 327..347 CDD:275368 5/19 (26%)
C2H2 Zn finger 357..377 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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