Protein Alignment Mtr4 and msk

DIOPT Version :9

• Sequence 1: NP_524929.1
• Gene: Mtr4 / 48782
• FlyBaseID: FBgn0001986
• Length: 1055
• Species: Drosophila melanogaster
• Sequence 2: NP_524780.1
• Gene: msk / 44747
• FlyBaseID: FBgn0026252
• Length: 1049
• Species: Drosophila melanogaster
• Alignment Length: 661
• Identity: 117/661 - (17%)
• Similarity: 210/661 - (31%)
• Gaps: 264/661 - (39%)

  Fly   574 PINSAFHLTYNMVLNL---LRVEEINPEYMLERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKD 635
            |:|.|.:|...|:..|   |..|:.....:|::...:         ::..:.|.||.|:.:|
  Fly   171 PLNEAMNLLLPMIYQLMVRLLAEQSEQSVLLQKQILK---------IYYALTQYTLPLDLIT--- 223

  Fly   636 EHNIASYHHIRSQL------------DQHGKQFRQWITKPQYLLPFL--------QPGRLVKVAA 680
            :...:.:..|..|:            |....:|..|.|| ::.|..:        .|..:|
  Fly   224 KEIFSQWMEICRQVADRAVPDSSHLDDDERTEFPYWKTK-KWALHIMVRMFERYGSPSNVV---- 283

  Fly   681 GSQEY----DW-------GIV-LNFKKQDQSRKNPLKAEPSVTIDVLLHVSEAAAKTGDTEPCKP 733
             |::|    :|       |:: :..|..||.| |.:...|.|..|||.::..|.:.....:..||
  Fly   284 -SEKYQKFAEWYLPTFSQGVLEVLLKILDQYR-NRVYVSPRVLTDVLNYLKNAVSHAYTWKLIKP 346

  Fly   734 NERGCME-------------------------------------VVPVAHTLITQISSIR----- 756
            :....::                                     .||.|.:|:..:...|
  Fly   347 HMVAVIQDVIFPIMSFTDSDQELWESDPYEYIRLKFDIFEDYATPVPAAQSLLHSMCKKRKGILP 411

  Fly   757 ---------VYFPNDLRSADNRR--------------------------AVLKTIQEAKKRFPLG 786
                     :..||    |||::                          ::|.|....:.:.|.|
  Fly   412 KAMATIMQIITSPN----ADNKQKDGALHMIGTLADVLLKKASYRDQVESMLTTYVFPEFQNPAG 472

  Fly   787 PP------VLNPIDDMNIK------------------DREFRDIVNT---ISQFEKRLEEHPLHK 824
            ..      ||:...|:.||                  |:|....|..   :..|....:|.|.:.
  Fly   473 HMRARACWVLHYFCDVQIKNPQVLAEIMRLTTNALLTDKELPVKVEAAIGLQMFISSQDEAPQYV 537

  Fly   825 SPELERIHR---------------RYQDKV--TLQKQLQDLKAEL-------------------- 852
            ..:::.|.:               ....|:  |..:||..:..|:
  Fly   538 EAQIKEITKELLTIIRETENEDLTNVMQKIVCTFTEQLLPVATEICQHLATTFSQVLESEEGSDE 602

  Fly   853 KA--ARSLLQ--------MDE-----LKHRKRVLRRMGYCKPGDVIEFKGR-------VACELSS 895
            ||  |.|||.        |:|     |.....|:..:|:....::.:|...       :..:..|
  Fly   603 KAITAMSLLNTIETLLSVMEEHPDVLLNLHPIVINVVGHIFQHNITDFYEETFSLVYDLTAKAIS 667

  Fly   896 ADELLMTEMIF-----NGV--FNDLTAPQAVALLSCFVCDEKSSESVKSATELSGPLRSMQDLAR 953
            .:...|.|:|:     :|:  |.|:     :..|..:|       :|.:...||.|        .
  Fly   668 PEMWQMLELIYQVFKKDGIDYFIDI-----MPALHNYV-------TVDTPAFLSNP--------N 712

  Fly   954 RIAKVSTECKLDL------DADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIF-EGSIIRCMR 1011
            |:..:...||..|      |.:.:..|    ||:|::..|||.    :..:..:| |.::.|..|
  Fly   713 RLLAILDMCKTMLTSSPGEDPECHAAK----LMEVIILQCKGQ----IDSVIHMFVELALSRLTR 769

  Fly  1012 RLEEL-LRQMC 1021
            .::.. ||.||
  Fly   770 EVQSSELRTMC 780

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mtr4	NP_524929.1	Dob10	91..1055	CDD:226947	117/661 (18%)
		DEAD	154..299	CDD:278688
		HELICc	390..554	CDD:238034
		rRNA_proc-arch	600..853	CDD:289976	64/425 (15%)
		DSHCT	881..1048	CDD:285374	34/163 (21%)
msk	NP_524780.1	SXM1	4..1013	CDD:227943	117/661 (18%)
		IBN_N	24..103	CDD:281761

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG4581
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900