DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtr4 and Suv3

DIOPT Version :9

Sequence 1:NP_524929.1 Gene:Mtr4 / 48782 FlyBaseID:FBgn0001986 Length:1055 Species:Drosophila melanogaster
Sequence 2:NP_001303458.1 Gene:Suv3 / 40543 FlyBaseID:FBgn0037232 Length:763 Species:Drosophila melanogaster


Alignment Length:600 Identity:124/600 - (20%)
Similarity:196/600 - (32%) Gaps:208/600 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DKGDVTEEPTKRLK------------QEASTVAVDDDNNADDE--------------PTRTLDID 99
            |..||..|.:.:|:            |.....::.::|..||.              ....|.:|
  Fly    63 DSEDVGSELSGKLEKAELLKILNKFTQRREIKSLCNENGLDDYLQQQAFGSFRRFCIEAENLPVD 127

  Fly   100 DSATLEALRTRIVTHLLDA-PKSCTHEVAAHPDQEYI-PLKPFSGV--PAKEYPFVLDPFQRQAI 160
            ...|...: |:...|:.|. |....|.....|..:.: .||..|.:  ||..|.      ..:||
  Fly   128 LHITFSDI-TQGAGHIDDIFPYFLRHAKTVFPHLDCMDDLKKISDLRQPANWYS------NARAI 185

  Fly   161 LCIDNSQSVLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVT 225
                ..:.|..:..|::|||.   :|:.:.|:||..| |..|:|.|:.:.:.:..:......|||
  Fly   186 ----TRKIVFHAGPTNSGKTY---HAMERYLSAKTGV-YCGPLKLLATEVYNKANERGTPCDLVT 242

  Fly   226 GD---VTINPS-----ASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETL 282
            |:   ..|:.|     .:|.:..|.:  |..|       ||  .|.|||..:||.:||..|....
  Fly   243 GEERKFGISESLPANHVACTVEMTSV--NTPY-------EV--AVIDEIQQIRDPQRGWAWTRAF 296

  Fly   283 I-LLPDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHL-IVD 345
            : |:.|.|..    ...|.|....:.:|.                        ..|:.:.: :.|
  Fly   297 LGLIADEVHV----CGEPGALDLLQKICE------------------------TTGETVEVRLYD 333

  Fly   346 EKGQFKEDNFTTAMAVLANAGEAGKGDQKGRHGGIKGTNAGQTNIFKIVKMIMERNFAPVIIFSF 410
            ...:...:|  ||:..|.|   ...||                                 .|..|
  Fly   334 RLTELTVEN--TALGSLDN---IVPGD---------------------------------CIVCF 360

  Fly   411 SKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRRG--IGIHHG 473
            ||.|  ||.:..                                 ::|      .||  :.:.:|
  Fly   361 SKHD--IYTVSR---------------------------------EIE------ARGKEVAVIYG 384

  Fly   474 GLLPILKETIEILFGE--GLIKALFATETFAMGLNMPARTVLF----------TAPRKFDGKKFR 526
            ||.|..|......|.:  ...|.:.||:...||||:..|.::|          ...|:.|     
  Fly   385 GLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGLNLSIRRIIFYSLIKPSMNERGEREID----- 444

  Fly   527 WISSGEYIQMAGRAGR-RGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINS------------- 577
            .||....:|:|||||| |...:.|.|.....|.:...  :.|:....:||..             
  Fly   445 TISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTL--QRILARTPEPIKQAGLHPTADQIELY 507

  Fly   578 AFHLTYNMVLNLLRV 592
            |:||..:.:.||:.:
  Fly   508 AYHLPSSSLSNLMDI 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtr4NP_524929.1 Dob10 91..1055 CDD:226947 115/557 (21%)
DEAD 154..299 CDD:278688 40/153 (26%)
HELICc 390..554 CDD:238034 39/178 (22%)
rRNA_proc-arch 600..853 CDD:289976
DSHCT 881..1048 CDD:285374
Suv3NP_001303458.1 DEXDc 193..323 CDD:238005 40/172 (23%)
SrmB 195..507 CDD:223587 92/440 (21%)
HELICc <357..461 CDD:238034 35/149 (23%)
SUV3_C 614..657 CDD:289293
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12131
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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