Protein Alignment Mtr4 and mus301

DIOPT Version :9

• Sequence 1: NP_524929.1
• Gene: Mtr4 / 48782
• FlyBaseID: FBgn0001986
• Length: 1055
• Species: Drosophila melanogaster
• Sequence 2: NP_648178.1
• Gene: mus301 / 38905
• FlyBaseID: FBgn0002899
• Length: 1051
• Species: Drosophila melanogaster
• Alignment Length: 1069
• Identity: 244/1069 - (22%)
• Similarity: 416/1069 - (38%)
• Gaps: 265/1069 - (24%)

  Fly    16 SVPPPALNQEEKPSGSSASKKGNKRQADGTTASKEATSSK--------------------GAEGD 60
            ||||   |...||..:||..  :|.|.|   .:.|..:.|                    ||  |
  Fly    95 SVPP---NSASKPDEASAPT--DKHQID---LADEENADKLFKKINLNDLSIAEMEDIFHGA--D 149

  Fly    61 DKGDVTEEPT---------KRLKQEASTVA-VDDDNNADDEPTRTLDIDDSATLEAL--RTRIVT 113
            |..|...:.|         |:.|.....:| :.||         ::.....:.:|.|  .|:.||
  Fly   150 DFSDPMVQNTQLFLDAMTFKKPKTPEKLLAPLKDD---------SMSFISKSVIEGLVQGTQYVT 205

  Fly   114 -------HLLDAPKSCTHEVA----AHPDQEYIPLK-PFSGVPAKEYPFVLD--------PFQRQ 158
                   .|||.....|...|    .:.|.:..|.| .|.|:|.|....:|:        .:|.:
  Fly   206 CEELKNQSLLDPVNWETQAFADFEKNNQDIDKFPSKGEFYGLPDKVKKMILEHKGINSLYEWQDE 270

  Fly   159 A--ILCIDNSQSVLVSAHTSAGKTVVAEYAIAKSLAAKQR-VIYTTPIKALSNQKFREFTDEFKD 220
            .  :..|...::::.:..||.|||:|||..:.:.|..::| |::..|..::..:|....:....|
  Fly   271 CLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLFILPYVSIVQEKVSAMSPFAID 335

  Fly   221 VGLVTGDVTINPSASCLIMTTEILRNM----LYRGSEIM---------REVGWVVFDEIHYMRDK 272
            :..:..:.|.. ...|........|::    :.:|:.:|         .|:|.||.||:|.:.:|
  Fly   336 LDFIVEEYTAG-KGKCPPQPRRKRRSLFIASIEKGAVLMDSLIDVQRPHEIGLVVVDELHLIGEK 399

  Fly   273 ERGVVWEETL---ILLPDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYT-DYRPTPLQHYIF 333
            .||...|..|   :.|..|::.|.:||||.|..:.:.:   |:..    ||| .:||..|:.||
  Fly   400 GRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSF---LNAD----VYTRGFRPVELKEYI- 456

  Fly   334 PAGGDGIHLIVDEKGQFKEDNFTTAMAVLANAGEAGKGDQKGRHGGIKGTNAGQTNIFKIVKMIM 398
            ..|.|  .|.::..||..|:.|..:.:|..|..||.|........|                :|.
  Fly   457 KCGPD--LLEINSAGQTLEEIFVPSRSVEYNYSEAVKRADPDHLAG----------------LIS 503

  Fly   399 ERNFAP---VIIFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRL----PQ 456
            |  .||   .::|..|:|:||..|:.::::   .| :.|..:...:..:|::...|:..    |.
  Fly   504 E--CAPEHCCLVFCPSRKNCENVALLLSRI---VP-KHKFFEHRRSEKLDLMDALDKMCGILSPV 562

  Fly   457 VENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFD 521
            :...||.   ||..||.||....::.||..:..|::..:..|.|.|.|:|:||:.|:..||  :.
  Fly   563 LAKTLPY---GIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAP--YV 622

  Fly   522 GKKFRWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGR-----------DIVQGKADPI 575
            |::|  ::..:|.||.|||||.||.:.|..||:...|.:..||:           .:.|.:|..:
  Fly   623 GQEF--LTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDKALSSLDQNEAVGL 685

  Fly   576 NSAF-----------HLTYNMVLN--LLRVEEINPEYMLERSFYQFQNQAALPGLHDQVEQKTLE 627
            .|..           ....|.::|  ||.|:..:.|..:        |:..|..|.:..:.|.|:
  Fly   686 QSLILSVVGLNLAECRRDLNRLVNSTLLSVQAKSLEVAV--------NEIVLRILREMFKNKVLQ 742

  Fly   628 LNKLTIKDEHNIASYHHIRSQLDQHGKQFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLN 692
            |.:...|.:.|  |...|.|   |...|..:.....:.|:....|.:|..:  |...:..||  :
  Fly   743 LAEPQAKSKIN--SSDIITS---QDVSQANRPAGDRRLLIGQSTPFKLTNI--GRAAFKAGI--D 798

  Fly   693 FKKQDQSRKNPLKAEPSVTIDVLLHVSEAAAKTGDTEPC-KPNERGCMEVVPVAHTLITQISSIR 756
            :|:.:...|...:|:..:.:...||:.....       | ..|||| .|:.|...:::     ..
  Fly   799 YKRANAIHKELKQAQQQLILTNYLHLLYLVV-------CFNSNERG-DELFPADASIL-----FG 850

  Fly   757 VYFPNDLRSADNRRAVLKTI--QEA------KKRFPLGP---------------PVLN--PIDDM 796
            ||....|.|    :|:.|.:  .||      |.:...||               .:||  ||..:
  Fly   851 VYTSLPLDS----QAMFKQLGFTEAHAARLFKTQSVQGPLSLQLNRLYKVLILADILNLLPIPSV 911

  Fly   797 ----NIKDREFRDIV-------NTISQFEKRLEEHPLHKSPELERIHRRYQDKVTLQKQLQDLKA 850
                |::....:.::       :.|.:..:.|||...:| |..|||..:.....|.:.:
  Fly   912 ASKYNVERGTLQHLISQSTAAASAIVRLCEELEEFWCYK-PLFERILHKMDRCGTFELE------ 969

  Fly   851 ELKAARSLLQMDELK-HRKRVLRRMGYCKPGDVIEFKG------------RVACELSSADELLMT 902
                  .|:::..:| :|.|.|...|:...||:...:.            |||.|:.||.::::.
  Fly   970 ------PLMELPAVKINRARQLYAAGFQTIGDIARVRPSHLVQSLEHMPLRVATEIVSAAKIILM 1028

  Fly   903 EMIFNGVFNDLTAPQAVALLSCFVCDEKS 931
            :.:      |....:...|..|....:|:
  Fly  1029 KKL------DHLEEETENLKDCLKTSDKN 1051

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mtr4	NP_524929.1	Dob10	91..1055	CDD:226947	219/964 (23%)
		DEAD	154..299	CDD:278688	39/163 (24%)
		HELICc	390..554	CDD:238034	50/170 (29%)
		rRNA_proc-arch	600..853	CDD:289976	57/289 (20%)
		DSHCT	881..1048	CDD:285374	11/63 (17%)
mus301	NP_648178.1	BRR2	247..998	CDD:224125	194/837 (23%)
		DEXHc_POLQ-like	247..449	CDD:350784	48/209 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45466318
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840