DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mtr4 and ipo7

DIOPT Version :9

Sequence 1:NP_524929.1 Gene:Mtr4 / 48782 FlyBaseID:FBgn0001986 Length:1055 Species:Drosophila melanogaster
Sequence 2:NP_957199.2 Gene:ipo7 / 321739 ZFINID:ZDB-GENE-030131-458 Length:1039 Species:Danio rerio


Alignment Length:1157 Identity:190/1157 - (16%)
Similarity:333/1157 - (28%) Gaps:487/1157 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LKQEASTVAVDDDNNADDEPTRTLDIDDSATLEALRTRIVTHLLDAPK-------SCTHEVAAH- 129
            ||...:....:.||...:.||.|:...|.   :.:|..||..::.:|:       :|.|.:..| 
Zfish    60 LKNMVTQFWTEGDNANTEAPTSTIPETDR---QFIRDNIVEAIIQSPERIRVQLTTCIHHMIKHD 121

  Fly   130 ------------------PDQEY---IPLKPFSGVPAKEYPFVLDPFQRQAILC-------IDNS 166
                              .:..|   |.|..:..|...||.   .|.:||.::.       :...
Zfish   122 YPGRWTAIVDKIGLYLQSDNSSYWLGILLCLYQLVKNYEYK---KPEERQPLVAAMQIFMPMLKD 183

  Fly   167 QSVLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDV--- 228
            :.:.:...||| .:|:.:..|.|.|.|..:  |..|::.::.|...|:.:..|.|  |..||   
Zfish   184 RFIQLLPDTSA-DSVLVQKQILKILYALFQ--YNLPLELINRQNLTEWMEILKTV--VDRDVPQE 243

  Fly   229 TIN---------PSASC------------------------------------LIMTTEILRNML 248
            |:.         |...|                                    .:...::|..:|
Zfish   244 TLQVDEDERPELPWWKCKKWALHILARLFERYGSPGNTTKEYTEFAELFLKGYAVAAQQVLLKVL 308

  Fly   249 YRGSE-------------------IMREVGW-------------VVFDEIHYMRDKERGVVWEET 281
            |:..|                   |...|.|             |||..:.|....|.  :|:| 
Zfish   309 YQYKEKQYVAPRVLQQTLNYINQGIAHAVTWKNLKPHIQGIVQDVVFPLMCYTDSDEE--LWQE- 370

  Fly   282 LILLPDNVRYV---------FLS-ATIPNARQFAEWVCHLHKQP-------CHVVYTDYRPTP-- 327
                 |...|:         |:| ||......|.  .|:..|:.       |:.:.||....|  
Zfish   371 -----DPYEYIRMKFDVFEDFISPATAAQTLLFT--ACNKRKEVLQKSMGFCYQILTDPATDPRK 428

  Fly   328 ----------------------------LQHYIFPAGGDGIHLIVDEKG---------------- 348
                                        ||:::||       |...|.|                
Zfish   429 KDGALHMIGSLAEILLKRKIYKDQMEFMLQNHVFP-------LFRSELGYMRARACWVLHYFCEV 486

  Fly   349 QFKED-NFTTAMAVLANAGEAGKGDQKGRHGGIKGTNAGQTNIFKIVKMIMERNFAPVIIFSFSK 412
            :||.| |...|:.:..|.                               ::..|..||.:.:...
Zfish   487 KFKNDQNLQVALELTRNC-------------------------------LINDNELPVKVEAAIA 520

  Fly   413 KDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRRGIGIHHGGLLP 477
            ....:...:.|| |:.||..:.::..:.....:  ||.|    .:.||   :::.|..:...:.|
Zfish   521 LQVLVSNQEKAK-DYITPHIRPVMQALLQIVRE--TEND----DLTNV---IQKMICEYSEEVTP 575

  Fly   478 ILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKFRWISSGEYIQMAGRAGR 542
            |               |:..|:..||..|.    |:.|.|                       ..
Zfish   576 I---------------AVEMTQHLAMTFNQ----VIQTGP-----------------------DE 598

  Fly   543 RGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFYQ 607
            .|.|||.:..:.|                           .|.:..||.|.|.:.|         
Zfish   599 EGGDDKAVTAMGI---------------------------LNTIDTLLSVVEDHKE--------- 627

  Fly   608 FQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYHHIRSQLDQHGKQFRQWITKPQYLLP---- 668
                     :..|:|...|::.. |:..:|.:..|..|.|.  .|....:|...:...|||    
Zfish   628 ---------ITQQLEGICLQVIG-TVLQQHVLEFYEEILSL--AHSLTCQQVSPQMWQLLPLIYD 680

  Fly   669 -FLQPGRLVKVAAGSQEYDW-----GIVLNFKKQDQSRKNPLKAEPSVTIDVLLHVSEA------ 721
             |.|.|           :|:     .::.|:                :|:|....:|:.      
Zfish   681 VFQQDG-----------FDYFTDMMPLLHNY----------------ITVDTDTLLSDTKYLEII 718

  Fly   722 -----AAKTGD--TEP--------------CKPNERGCMEVVPV-----------------AHTL 748
                 ...|||  .:|              ||  .||..:|||:                 ..|:
Zfish   719 YNMCKKILTGDPGEDPECHAAKLLEVIILQCK--GRGIDQVVPLFVTTALERLTREVKTSELRTM 781

  Fly   749 ITQISSIRVYFPNDLRSADNRRAVLKTIQEAKKRFPLG-PPVLNPIDDMNIKDREFRDIVNTISQ 812
            ..|::...:|:...|        :|.|::..  |||.. .|:.|......:||      ::....
Zfish   782 CLQVAIAAIYYSPPL--------LLNTLENL--RFPNNTEPITNHFISQWLKD------IDCFLG 830

  Fly   813 FEKR------------LEEHP--------------------LHKSPELERIHRRYQDKVTLQKQL 845
            ...|            ||:.|                    |.::......|...:|......:.
Zfish   831 LHDRKMCVLGLCALMDLEQRPQAVNQVAGQLLPAAILLFNGLKRAYACRAEHENDEDDDEEDGEE 895

  Fly   846 QDLKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACE---------LSSADELLM 901
            ::..|||.:....:..:..::.:.:.::.|  :.||..:::...|.|         :...|.|:.
Zfish   896 EEENAELGSDEDDIDDEGQEYLEMLAKQAG--EDGDDEDWEEDDAEETALEGYTTLVDDEDNLVD 958

  Fly   902 TEMIFNGVFNDLTAPQAV---ALLSCFVCDEKSSESVKSATELSGPLRSMQD 950
            ...||..:..::.|....   |:..|.  ||:..:.::....|:...|:..:
Zfish   959 EYQIFKAIMQNVQARDPAWYQAITHCL--DEEQRKQLQDIATLADQRRAAHE 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtr4NP_524929.1 Dob10 91..1055 CDD:226947 186/1139 (16%)
DEAD 154..299 CDD:278688 43/241 (18%)
HELICc 390..554 CDD:238034 28/163 (17%)
rRNA_proc-arch 600..853 CDD:289976 54/339 (16%)
DSHCT 881..1048 CDD:285374 14/82 (17%)
ipo7NP_957199.2 SXM1 15..998 CDD:227943 188/1145 (16%)
IBN_N 22..101 CDD:281761 11/43 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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