DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtr4 and Ipo8

DIOPT Version :9

Sequence 1:NP_524929.1 Gene:Mtr4 / 48782 FlyBaseID:FBgn0001986 Length:1055 Species:Drosophila melanogaster
Sequence 2:NP_001074582.1 Gene:Ipo8 / 320727 MGIID:2444611 Length:1010 Species:Mus musculus


Alignment Length:746 Identity:147/746 - (19%)
Similarity:259/746 - (34%) Gaps:221/746 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 KIVKMIMERNFAPVIIFSFSKKDCEI-YAMQMAKLDFNTPDEKKLVD--EVFNNAMD-------- 445
            :|::::.:.:...|::   .|:..:| ||:....|.....:.:.:..  |:|...:|        
Mouse   185 QILQLLPDASHYSVLL---QKQILKIFYALVQYALPLQLVNHQTMTTWMEIFRTIIDRTVPPETL 246

  Fly   446 VLTEEDRRLPQ----------VENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATET 500
            .:.|:||  |:          :..|..|..|     :|....:.||..|  |.|      |..:|
Mouse   247 QIDEDDR--PELVWWKCKKWALHIVARLFER-----YGSPGNVTKEYFE--FSE------FFLKT 296

  Fly   501 FAMGLNMPARTVL-------FTAPRKFDGKKFRWISSG-----EYIQMAGRAGRRGLDDKGIVIL 553
            :|:|:......:|       :.|||... :.|.:::.|     .:.||  :...:.:.:..|..:
Mouse   297 YAVGIQQVLLKILDQYRQKEYIAPRVLQ-QAFNYLNQGVVHAVTWKQM--KPHIQNISEDVIFSV 358

  Fly   554 MI----DEKV---SP----AVGRDIVQGKADPINSAFHLTYNMVLNLLRVEEINPEYM------- 600
            |.    ||::   .|    .:..||.:..|.|..:|..|.|...   .:.:|:.|:.|       
Mouse   359 MCYKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAA---KKRKEVLPKMMAFCYQIL 420

  Fly   601 LERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYHHIRSQLDQHGKQFRQ---WITK 662
            .:.:|...:...||..:....|   :.|.|...||:..:...:|:...|..:....|.   |:..
Mouse   421 TDPNFDPRKKDGALHVIGSLAE---ILLKKSLFKDQIELFLQNHVFPLLMSNLGYLRARSCWVLH 482

  Fly   663 PQYLLPF---LQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNPLKAEPSVTIDVLLHVSEAAAK 724
            ....|.|   |.....|::|.             |...:..:.|:|.|.::.:..|:. ::|.||
Mouse   483 AFSSLKFHNELNLRNAVELAK-------------KSLIEDEEMPVKVEAALALQSLIS-NQAQAK 533

  Fly   725 TGDTEPCKPNERGCM-------------EVVPVAHTLITQISSIRVYFPNDLRSADNRRAVLKTI 776
                |..||..|..|             :|..|...||.:.|.            |.....:.|.
Mouse   534 ----EHMKPYVRFIMQELLHIVRETENDDVTNVIQKLICEYSQ------------DVASIAVDTT 582

  Fly   777 QEAKKRFPLGPPVLNPIDDMNIKDREF--RDIVNTISQFEKRLEEHPLHKSPELERIHRRYQDKV 839
            |...:.|   ..||...:...|:|:..  ..|::||......:|:|| ....:||.|..|..|.|
Mouse   583 QHLAEIF---GKVLQSDEYEEIEDKTVMAMGILHTIDTILTVVEDHP-EIIQQLENICLRIIDLV 643

  Fly   840 TLQKQLQDLKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSAD--ELL-- 900
             |||.:.:...|                              ::.....:.|...|..  :||  
Mouse   644 -LQKHVIEFYEE------------------------------ILSLAYNLTCHTISPQMWQLLGI 677

  Fly   901 MTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGPLRSMQDLARRIAKVSTECKLD 965
            :.|:.....|...|  ..:.||..:|       :|.:...||.|        :.:..:.|.|:..
Mouse   678 LYEVFQQDCFEYFT--DMMPLLHNYV-------TVDTNALLSNP--------KHLEVLFTMCRKV 725

  Fly   966 L------DADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEEL-LRQMCQA 1023
            |      ||:.|..|    |::|::..|||.              .|.:|:....:| |.::.:.
Mouse   726 LCGEAGEDAECYAAK----LLEVIILQCKGR--------------GIDQCIPLFIQLVLERLTRG 772

  Fly  1024 SKTIGNTDLENKFSEGIRLLKRDIVFAASLY 1054
            .||          || :|.:...:..||..|
Mouse   773 VKT----------SE-LRTMCLQVAIAALYY 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtr4NP_524929.1 Dob10 91..1055 CDD:226947 147/746 (20%)
DEAD 154..299 CDD:278688
HELICc 390..554 CDD:238034 36/194 (19%)
rRNA_proc-arch 600..853 CDD:289976 60/280 (21%)
DSHCT 881..1048 CDD:285374 35/177 (20%)
Ipo8NP_001074582.1 SXM1 15..995 CDD:227943 147/746 (20%)
IBN_N 22..101 CDD:281761
CAS_CSE1 <626..>869 CDD:281384 49/245 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 886..932
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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