DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtr4 and MTREX

DIOPT Version :9

Sequence 1:NP_524929.1 Gene:Mtr4 / 48782 FlyBaseID:FBgn0001986 Length:1055 Species:Drosophila melanogaster
Sequence 2:NP_056175.3 Gene:MTREX / 23517 HGNCID:18734 Length:1042 Species:Homo sapiens


Alignment Length:1069 Identity:668/1069 - (62%)
Similarity:821/1069 - (76%) Gaps:50/1069 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EELFDCF--DEVTPSVPPPALNQEEKPSG------SSASKKGNKRQADGTTASKEATSSKGAEGD 60
            :|||..|  |..|.:   .....:||..|      .||.|.|  ::.||...| |:|::    |.
Human     7 DELFSVFEGDSTTAA---GTKKDKEKDKGKWKGPPGSADKAG--KRFDGKLQS-ESTNN----GK 61

  Fly    61 DKGDV----TEEPT--KRLKQEASTVAVDDDNNADDEPTRTLDIDDSATLEALRTRIVTHLLDAP 119
            :|.||    |:||.  |:.:.|.|                   |.:..:|..|..|:....::..
Human    62 NKRDVDFEGTDEPIFGKKPRIEES-------------------ITEDLSLADLMPRVKVQSVETV 107

  Fly   120 KSCTHEVAAHPDQEYIPLKPFSGVPAKEYPFVLDPFQRQAILCIDNSQSVLVSAHTSAGKTVVAE 184
            :.||||||...:::|:||||..|..||||||:||.|||:||.|:||:|||||||||||||||.||
Human   108 EGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAE 172

  Fly   185 YAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDVTINPSASCLIMTTEILRNMLY 249
            ||||.:|..|||||:|:|||||||||:||..:||:||||:||||||||:||||:|||||||:|||
Human   173 YAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLY 237

  Fly   250 RGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDNVRYVFLSATIPNARQFAEWVCHLHKQ 314
            ||||:||||.||:|||||||||.|||||||||:|||||||.|||||||||||||||||:||||||
Human   238 RGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQ 302

  Fly   315 PCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQFKEDNFTTAMAVLANAGEAGKGDQKGRHGG 379
            ||||:||||||||||||||||||||:||:|||.|.|:||||.|||.||.:||:..|||||||.||
Human   303 PCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQKGRKGG 367

  Fly   380 IKGTNAGQTNIFKIVKMIMERNFAPVIIFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAM 444
            .|    |.:|:||||||||||||.|||||||||||||.||:||.||||||.:|||:|:|||:||:
Human   368 TK----GPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAI 428

  Fly   445 DVLTEEDRRLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPA 509
            |.|::||::|||||:|||||:||||||||||||||||||||||.||||||||||||||||:||||
Human   429 DCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPA 493

  Fly   510 RTVLFTAPRKFDGKKFRWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGRDIVQGKADP 574
            ||||||..||||||.||||||||||||:|||||||:||:||||||:|||:||.:|:.:::|.|||
Human   494 RTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADP 558

  Fly   575 INSAFHLTYNMVLNLLRVEEINPEYMLERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNI 639
            :|||||||||||||||||||||||||||:||||||:..|:||:.::|:....:.||:.|.:|.::
Human   559 LNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESV 623

  Fly   640 ASYHHIRSQLDQHGKQFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNPL 704
            ..|:.||.||.:.||:..::|.||:|.||||||||||||.....::.||:|:||.|:...:.|..
Human   624 VIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSG 688

  Fly   705 KAEPSVTIDVLLHVSEAAAKTGDTE---PCKPNERGCMEVVPVAHTLITQISSIRVYFPNDLRSA 766
            :.:|...::|||..|:.:.|...||   |.||:|:|.|:||||...|::.|||:|:|.|.|||..
Human   689 ELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPV 753

  Fly   767 DNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNIKDREFRDIVNTISQFEKRLEEHPLHKSPELERI 831
            |||::|||:|||.:||||.|.|:|:|||||.|:|:..:.::..:..||.|:..||||..|.||.:
Human   754 DNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 818

  Fly   832 HRRYQDKVTLQKQLQDLKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSA 896
            :...:.|..:...::..|.|||.||::|||||||.|||||||:|:....||||.|||||||:|||
Human   819 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSA 883

  Fly   897 DELLMTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGPLRSMQDLARRIAKVSTE 961
            ||||:|||:|||:||||:|.||.|||||||..|.|||..|...:|:||||.||:.|:||||||.|
Human   884 DELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAE 948

  Fly   962 CKLDLDADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEELLRQMCQASKT 1026
            .||::|.:||:..|||.|||||..|..|::|..:|||||:||||||||||||||||||||||:|.
Human   949 AKLEIDEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKA 1013

  Fly  1027 IGNTDLENKFSEGIRLLKRDIVFAASLYL 1055
            ||||:|||||:|||..:||||||||||||
Human  1014 IGNTELENKFAEGITKIKRDIVFAASLYL 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtr4NP_524929.1 Dob10 91..1055 CDD:226947 638/966 (66%)
DEAD 154..299 CDD:278688 117/144 (81%)
HELICc 390..554 CDD:238034 137/163 (84%)
rRNA_proc-arch 600..853 CDD:289976 111/255 (44%)
DSHCT 881..1048 CDD:285374 117/166 (70%)
MTREXNP_056175.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..74 19/67 (28%)
Dob10 68..1042 CDD:226947 644/996 (65%)
DEAD 144..287 CDD:278688 116/142 (82%)
DEIH box 252..255 2/2 (100%)
HELICc 374..538 CDD:238034 137/163 (84%)
rRNA_proc-arch 584..840 CDD:289976 111/255 (44%)
DSHCT 868..1035 CDD:285374 117/166 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158872
Domainoid 1 1.000 249 1.000 Domainoid score I2140
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6257
Inparanoid 1 1.050 1322 1.000 Inparanoid score I150
Isobase 1 0.950 - 0 Normalized mean entropy S388
OMA 1 1.010 - - QHG53687
OrthoDB 1 1.010 - - D176060at2759
OrthoFinder 1 1.000 - - FOG0003580
OrthoInspector 1 1.000 - - oto90704
orthoMCL 1 0.900 - - OOG6_100340
Panther 1 1.100 - - LDO PTHR12131
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2451
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.720

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