DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtr4 and HFM1

DIOPT Version :9

Sequence 1:NP_524929.1 Gene:Mtr4 / 48782 FlyBaseID:FBgn0001986 Length:1055 Species:Drosophila melanogaster
Sequence 2:NP_001017975.5 Gene:HFM1 / 164045 HGNCID:20193 Length:1435 Species:Homo sapiens


Alignment Length:1122 Identity:249/1122 - (22%)
Similarity:434/1122 - (38%) Gaps:336/1122 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TTASKEATSSKGAE----------------GDDKGDVTEEPTKRLKQEASTV---AVDDDNNADD 90
            |.||::..:..|.|                .:|||:.|....|||.:.:..:   |..:||..|.
Human   122 TYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKRLFKISDNIHGSAYSNDNELDS 186

  Fly    91 ----------EPTRTLDIDDSATLEALR--------------TRIVTHLLDAPKSCT----HEVA 127
                      |..:....:.|.:.:..:              :.|...:..||....    |::.
Human   187 HIGSVKIVQTEMNKGKSRNYSNSKQKFQYSANVFTANNAFSASEIGEGMFKAPSFSVAFQPHDIQ 251

  Fly   128 AHPDQEYIPLKPFSGVPA------KEYPFVLDPFQRQA---ILCIDNSQSVLVSAHTSAGKTVVA 183
            ...:.....||..:.:||      ||:|: .:..|.:|   :|..|  ::.::.|.|.:|||||.
Human   252 EVTENGLGSLKAVTEIPAKFRSIFKEFPY-FNYIQSKAFDDLLYTD--RNFVICAPTGSGKTVVF 313

  Fly   184 EYAIAKSLA------AKQRVIYTTPIKALSNQKFREFTDEFKDVGL----VTGDVTINP----SA 234
            |.||.:.|.      ...:::|..|||||.:|:|.::.::|..:||    :|||..::.    ..
Human   314 ELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKFGPIGLNCKELTGDTVMDDLFEIQH 378

  Fly   235 SCLIMTT-----EILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWE--------------- 279
            :.:||||     .:.|.  :|.:.:::.|...:.||:|.::|:.||...|               
Human   379 AHIIMTTPEKWDSMTRK--WRDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQT 441

  Fly   280 --ETLILLPDNVRYVFLSATIPNARQFAEWVCHLHKQP--CHVVYTDYRPTPLQHYI--FPAGGD 338
              .|...:|  :|:|.:|||||||...|||:.. .::|  |..:...:||..||..:  ||...:
Human   442 LKNTSTAIP--MRFVAVSATIPNAEDIAEWLSD-GERPAVCLKMDESHRPVKLQKVVLGFPCSSN 503

  Fly   339 GIHLIVDEKGQFKED---NFTTAMAVLANAGEAGKGDQKGRHGGIKGTNAGQTNIFKIVKMIMER 400
                    :.:||.|   |:..|..:...:      |||                          
Human   504 --------QTEFKFDLTLNYKIASVIQMYS------DQK-------------------------- 528

  Fly   401 NFAPVIIFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLT-EEDRRLPQV------E 458
               |.::|..::|..:..|..:.|                 :|..::| |:.:||.:.      .
Human   529 ---PTLVFCATRKGVQQAASVLVK-----------------DAKFIMTVEQKQRLQKYAYSVRDS 573

  Fly   459 NVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGK 523
            .:..:|:.|...||.|:....::.:|..|..|.:..||.|.|.|||:|:||..|:..:...:.|.
Human   574 KLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGG 638

  Fly   524 KFRWISSGEYIQMAGRAGRRGLD--------------DKGIVILMIDEKVSPAVGRDIVQGKADP 574
            .|...|..:.:||.|||||...|              ||.|.:|...:.|..::.|.:::     
Human   639 LFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRDKYIQMLACRDTVESSLHRHLIE----- 698

  Fly   575 INSAFHLTYNMVLNL-----LRVEEINPEYMLERSFYQFQNQAALPGLH-DQVEQKTLELNKLTI 633
                 ||...:||:.     :.||.|....:..|:.....:.....||: |.:|.|   |.:|.:
Human   699 -----HLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYGFASGLNKDGIEAK---LQELCL 755

  Fly   634 KDEHNIASYHHIRSQLDQHGKQFR----------QWIT----KPQYLLPFLQPGR-----LVKVA 679
            |:.::::|...|:  :|: |..|:          .:||    |..|.:    .|:     ||.:.
Human   756 KNLNDLSSLDLIK--MDE-GVNFKPTEAGRLMAWYYITFETVKKFYTI----SGKETLSDLVTLI 813

  Fly   680 AGSQEY-DWGIVLNFKKQDQSRKNPLKAEPS-VTIDVLLHVSEAAAKTGDTEPCKPN-----ERG 737
            ||.:|: |..:.:|.||    ..|.|..:|: :||...:   |...||.:   .|.|     :.|
Human   814 AGCKEFLDIQLRINEKK----TLNTLNKDPNRITIRFPM---EGRIKTRE---MKVNCLIQAQLG 868

  Fly   738 CMEVVPVAHTLITQISSIRVYFPNDLRSADNRRAVLKTIQEAKKRFPLGPPVLNPIDD-MNIKDR 801
            |   :|:....:|                          |:..|.|..|..:...:.| :..:::
Human   869 C---IPIQDFALT--------------------------QDTAKIFRHGSRITRWLSDFVAAQEK 904

  Fly   802 EFRDIVNTI---SQFEKRLEEHPLHKSPELERIHRRYQDKVTLQKQLQDLKAELKAARSLLQMDE 863
            :|..::|::   ..|..:|.|:.||.|.:||:|      .:||...:  :.|.|.:.:.:.:.| 
Human   905 KFAVLLNSLILAKCFRCKLWENSLHVSKQLEKI------GITLSNAI--VNAGLTSFKKIEETD- 960

  Fly   864 LKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELLMTEMIFNGVFNDLTAPQAVALLSCFVCD 928
            .:..:.:|.|    .|....:.|..|   :......|..|.|..  ::|.||...|.::      
Human   961 ARELELILNR----HPPFGTQIKETV---MYLPKYELKVEQITR--YSDTTAEILVTVI------ 1010

  Fly   929 EKSSESVKSATELSGPLRSMQDL-ARRIAKVSTECKLDL-DAD---TYVDKFKPFLMDVVL---- 984
                            ||:.:.| .:|.|..|....|.: |||   .|:.|    :.|.||    
Human  1011 ----------------LRNFEQLQTKRTASDSHYVTLIIGDADNQVVYLHK----ITDSVLLKAG 1055

  Fly   985 AWCKGSSFLAVCKMTDI 1001
            :|.|..:.....|..|:
Human  1056 SWAKKIAVKRALKSEDL 1072

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtr4NP_524929.1 Dob10 91..1055 CDD:226947 233/1047 (22%)
DEAD 154..299 CDD:278688 50/183 (27%)
HELICc 390..554 CDD:238034 43/184 (23%)
rRNA_proc-arch 600..853 CDD:289976 61/283 (22%)
DSHCT 881..1048 CDD:285374 28/130 (22%)
HFM1NP_001017975.5 BRR2 264..970 CDD:224125 195/841 (23%)
DEXHc_HFM1 280..488 CDD:350781 59/215 (27%)
DEAH box 411..414 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1109..1139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1295..1315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D176060at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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