DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant35A and Galntl6

DIOPT Version :10

Sequence 1:NP_652069.2 Gene:Pgant35A / 48775 FlyBaseID:FBgn0001970 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001129228.1 Gene:Galntl6 / 361142 RGDID:1564773 Length:601 Species:Rattus norvegicus


Alignment Length:500 Identity:189/500 - (37%)
Similarity:270/500 - (54%) Gaps:64/500 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 DIGYKHHAFNALVSNNIGLFRAIPDTRHKVCDRQETTEAENLPQASIVMCFYNEHKMTLMRSIKT 170
            |..|:.:.||..|||||.|.|::||.||..|  :.....|.||..||::.|:||...:|:|:|.:
  Rat   100 DSAYRENGFNIFVSNNIALERSLPDIRHANC--KHKMYLERLPNTSIIIPFHNEGWTSLLRTIHS 162

  Fly   171 VLERTPSYLLREIILVDDHSDLPELEFHLHGDLRARLKYDNLRYIKNEQREGLIRSRVIGAREAV 235
            ::.|||..|:.|||||||.||...|:..|. |..||  :..:|.::.::||||||:|::||..|.
  Rat   163 IINRTPESLIAEIILVDDFSDREHLKDKLE-DYMAR--FPIVRIVRTKKREGLIRTRLLGASVAR 224

  Fly   236 GDVLVFLDSHIEVNQQWLEPLLRLIKSENATLAVPVIDLINADTFEY--TPSPLVRGGFNWGLHF 298
            |:||.|||||.|||..||.|||..|...:.|:..|:||:|:...|.|  .....:||.|:|.:::
  Rat   225 GEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHSHFGYEAQAGDAMRGAFDWEMYY 289

  Fly   299 RWENLPEGTLKVPE----DFRGPFRSPTMAGGLFAVNRKYFQHLGEYDMAMDIWGGENIEISFRA 359
            :...:|      ||    |...||.||.||||||||:||:|..||.||..::|||||..||||:.
  Rat   290 KRIPIP------PELQRADPSEPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKV 348

  Fly   360 WQCGGAIKIVPCSRVGHIFRKRRPYTSPDGANTMLKNSLRLAHVWMDQYKDYYLKHEKVPKTYDY 424
            |.|||.:..|||||||||:||..||..|.| .::.:|..|:|..|||::.:|..:.....:....
  Rat   349 WMCGGEMFDVPCSRVGHIYRKYVPYKVPSG-TSLARNLKRVAETWMDEFAEYIYQRRPEYRHLST 412

  Fly   425 GDISDRLKLRERLQCRDFAWYLKNV---YPELHVPGEESKKSAAAPIFQPWHSRKRNYVDTFQLR 486
            ||||.:.:||:||:|:||.|::..|   .|:.:.|.|        |:...|.          ::|
  Rat   413 GDISAQKELRKRLKCKDFKWFMAAVAWDVPKYYPPVE--------PLPAAWG----------EIR 459

  Fly   487 LTGTELCAAVVAPKVKGFWKKGSSLQLQTCRRTPNQLWYETEK------------AEIVLDKLLC 539
            .....||   |..|   ....|:.|:|..|.:..::..:..|:            .|.:..:..|
  Rat   460 NVAANLC---VDSK---HGAMGTELRLDICVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFC 518

  Fly   540 LEA-SGDAQVTVNKCHEMLGDQQW--RHTRNANSPVYNMAKGTCL 581
            |:| |..:.||:..||.|.|:|.|  |..|....||.|    :|:
  Rat   519 LDAISHSSPVTLYDCHGMKGNQLWGYREDRTLFHPVSN----SCM 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant35ANP_652069.2 pp-GalNAc-T 151..450 CDD:133004 136/307 (44%)
beta-trefoil_Ricin_GALNT11 478..609 CDD:467318 29/118 (25%)
Galntl6NP_001129228.1 pp-GalNAc-T 143..438 CDD:133004 135/304 (44%)
beta-trefoil_Ricin_GALNTL6 449..594 CDD:467355 32/138 (23%)

Return to query results.
Submit another query.