DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant35A and Galnt12

DIOPT Version :9

Sequence 1:NP_652069.2 Gene:Pgant35A / 48775 FlyBaseID:FBgn0001970 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_232988.6 Gene:Galnt12 / 313233 RGDID:1562001 Length:576 Species:Rattus norvegicus


Alignment Length:464 Identity:185/464 - (39%)
Similarity:269/464 - (57%) Gaps:46/464 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLLCKSC--GLGTLLVAVVWLLALLFYSHSLRSSIRSAGWRIDEGNATPRAELSYQARVTVGCTP 68
            |.:.:.|  ||.....|::.||||......||:..||.                     ||...|
  Rat     4 RAVRRRCPRGLRRGREALLALLALAGLGAVLRARSRSG---------------------TVDPVP 47

  Fly    69 NASITTG-ESPAAPKPPSDPEQLELLG-VVR---NKQDKYIRDIGYKHHAFNALVSNNIGLFRAI 128
            ..:...| ..|..|:||...:.|...| .||   ..::..:::...:.|..|..:|:.|.|.|.:
  Rat    48 TRTPHPGRHEPVLPRPPLPADALGAKGEAVRLQLQGEELRLQEESVQRHQINIYLSDRISLHRRL 112

  Fly   129 PDTRHKVCDRQETTEAENLPQASIVMCFYNEHKMTLMRSIKTVLERTPSYLLREIILVDDHSDLP 193
            |:..:.:| |:...:.:|||:.|:|:.||||...||:|::.:|||.:|..||.|:|||||:||..
  Rat   113 PERWNPLC-REVKYDYDNLPKTSVVIAFYNEAWSTLLRTVYSVLETSPDILLEEVILVDDYSDRE 176

  Fly   194 ELEFHLHGDLRARLKYDNLRYIKNEQREGLIRSRVIGAREAVGDVLVFLDSHIEVNQQWLEPLLR 258
            .|:..|..:|.   :...:|.|:..:||||:|:|::||..|.|:||.|||.|.|.::.||||||:
  Rat   177 HLKEPLANELS---QLPKVRLIRASKREGLVRARLLGASAARGEVLTFLDCHCECHEGWLEPLLQ 238

  Fly   259 LIKSENATLAVPVIDLINADTFEY---TPSPLVRGGFNWGLHFRWENLPEGTLKVPEDFRGP--- 317
            .|..:.:.:..||||:|:.:||||   :..|.: |||:|.|.|.|..:|:...|:   .|.|   
  Rat   239 RIHEKESAVVCPVIDVIDWNTFEYLGNSGEPQI-GGFDWRLVFTWHVVPQRERKL---MRSPIDV 299

  Fly   318 FRSPTMAGGLFAVNRKYFQHLGEYDMAMDIWGGENIEISFRAWQCGGAIKIVPCSRVGHIFRKRR 382
            .||||||||||||:::||::||.||..|::|||||:|.|||.|||||.::..|||.|||:|.|:.
  Rat   300 IRSPTMAGGLFAVSKRYFEYLGSYDTGMEVWGGENLEFSFRIWQCGGTLETHPCSHVGHVFPKQA 364

  Fly   383 PYTSPDGANTMLKNSLRLAHVWMDQYKDYYLKHEKVPKTYDYGDISDRLKLRERLQCRDFAWYLK 447
            ||:    .:..|.||:|.|.||||.:|:.|.......:...:||:::|.|||.:|||:||.|:|.
  Rat   365 PYS----RSKALANSVRAAEVWMDDFKELYYHRNPQARLEPFGDVTERKKLRAKLQCKDFKWFLD 425

  Fly   448 NVYPELHVP 456
            .||||||||
  Rat   426 TVYPELHVP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant35ANP_652069.2 pp-GalNAc-T 151..450 CDD:133004 140/304 (46%)
RICIN 489..610 CDD:214672
RICIN 490..609 CDD:238092
Galnt12XP_232988.6 pp-GalNAc-T 134..428 CDD:133004 140/304 (46%)
Ricin_B_lectin 440..569 CDD:395527
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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