DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant35A and Galnt18

DIOPT Version :9

Sequence 1:NP_652069.2 Gene:Pgant35A / 48775 FlyBaseID:FBgn0001970 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_776100.2 Gene:Galnt18 / 233733 MGIID:2446239 Length:622 Species:Mus musculus


Alignment Length:572 Identity:176/572 - (30%)
Similarity:274/572 - (47%) Gaps:104/572 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 ESPAAP-----KPPSDPEQLELLGVVRNKQDKYIRDIGYKHHAFNALVSNNIGLFRAIPDTRHKV 135
            |:||.|     :|.:|.......|...:.:.:.:....::::.:||.:|:.:.|.|.:||.|...
Mouse    79 EAPAKPEEAEAEPFTDSSLFAHWGQELSPEGRRVALKQFQYYGYNAYLSDRLPLDRPLPDLRPSG 143

  Fly   136 CDRQETTEAENLPQASIVMCFYNEHKMTLMRSIKTVLERTPSYLLREIILVDDHSDLPELEFHL- 199
            |  :..:..::||:.|||..|.||....|:|||.:.:|||||:||:|||||||:|...||:..| 
Mouse   144 C--RNLSFPDSLPEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEIILVDDNSSNEELKEKLT 206

  Fly   200 -HGDLRARLKYDNLRYIKNEQREGLIRSRVIGAREAVGDVLVFLDSHIEVNQQWLEPLLRLIKSE 263
             :.|.....|...::.:::.::||||||||.|.|.|...|:...|:|:|.|..|.||:|..||..
Mouse   207 EYVDKVNGQKPGFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKEN 271

  Fly   264 NATLAVPVIDLINADTFEYTPSPLVRGGFNWGLHFRWENLPEGTLKVPEDFRGPFRSPTMAGGLF 328
            ...:..|..|.|..|.||....||...||:|.|..|:.|.|:...|: |:...|.|||.:. |.|
Mouse   272 RKRIISPSFDNIKYDNFEIEEYPLAAQGFDWELWCRYLNPPKAWWKL-ENSTAPIRSPALI-GCF 334

  Fly   329 AVNRKYFQHLGEYDMAMDIWGGENIEISFR---------------AWQCGGAIKIVPCSRVGHIF 378
            .|:|:||:.:|..|..|:::||||:|:..|               .|||||:::::||||:.||.
Mouse   335 IVDRQYFEEIGLLDEGMEVYGGENVELGIRVSEISHTGLSSAPMMVWQCGGSVEVLPCSRIAHIE 399

  Fly   379 RKRRPYTSPDGANTMLKNSLRLAHVWMDQYKDYYLKHEKVPKT---YDYGDISDRLKLRERLQCR 440
            |..:|||. |....:.:|:||:|.||||::|.:......:|:.   .|.|||:.|..||::|||:
Mouse   400 RAHKPYTE-DLTAHVRRNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCK 463

  Fly   441 DFAWYLKNVYPELHVPG------------------EESKKSAAAPIFQPWHS---RKRNYVDTFQ 484
            .|.|||.:||||:.:..                  ::...:...||....|.   :...|..:.|
Mouse   464 TFRWYLVSVYPEMRMYSDIIAYGVLQNSLKTDLCLDQGPDTENVPIVYICHGMTPQNVYYTSSQQ 528

  Fly   485 LR---LTGTE------------------LCAAVVAPKVKGFWK--KGSSLQLQTCRRTPNQLWYE 526
            :.   |:.|.                  .|:...|.::|..|:  :|.|:|.:..:|        
Mouse   529 IHVGILSPTVDDDDNRCLVDVNSRPRLIECSYAKAKRMKLHWQFSQGGSIQNRKSKR-------- 585

  Fly   527 TEKAEIVLDKLLCLEASGDA------QVTVNKCHEMLGDQQWRHTRNANSPV 572
                        |||...::      |:.:.||    ..|.|..|....|.|
Mouse   586 ------------CLELQENSDMEFGFQLVLQKC----SGQHWTITNVLRSLV 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant35ANP_652069.2 pp-GalNAc-T 151..450 CDD:133004 128/318 (40%)
RICIN 489..610 CDD:214672 20/110 (18%)
RICIN 490..609 CDD:238092 20/109 (18%)
Galnt18NP_776100.2 Catalytic subdomain A 153..267 52/113 (46%)
pp-GalNAc-T 157..473 CDD:133004 128/318 (40%)
Catalytic subdomain B 324..400 30/76 (39%)
Ricin_B_lectin 484..611 CDD:279046 22/150 (15%)
RICIN 486..613 CDD:238092 23/150 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.