DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant35A and Galnt9

DIOPT Version :9

Sequence 1:NP_652069.2 Gene:Pgant35A / 48775 FlyBaseID:FBgn0001970 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_938048.2 Gene:Galnt9 / 231605 MGIID:2677965 Length:604 Species:Mus musculus


Alignment Length:535 Identity:191/535 - (35%)
Similarity:271/535 - (50%) Gaps:90/535 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 GVVRNKQD-------KYIRDIGYKHHAFNALVSNNIGLFRAIPDTRHKVCDRQETTEAENLPQAS 151
            ||....||       |: .|.||     ||.:|:.|.|.|.|||.|.|.|  ::.|.:|:|||.|
Mouse    99 GVAATLQDDSQETEGKF-EDFGY-----NAQLSDRISLDRTIPDYRPKRC--RQITYSEDLPQIS 155

  Fly   152 IVMCFYNEHKMTLMRSIKTVLERTPSYLLREIILVDDHSDLPELEFHLHGDLRARLKYDNL-RYI 215
            :|..|.||....::||:.:|:..|||.||:|:|||||:||..||:|:|  |.....:|..| :.:
Mouse   156 VVFIFVNEALSVILRSVHSVVNHTPSQLLKEVILVDDNSDNVELKFNL--DQYVHKRYPGLVKVV 218

  Fly   216 KNEQREGLIRSRVIGAREAVGDVLVFLDSHIEVNQQWLEPLLRLIKSENATLAVPVIDLINADTF 280
            :|.:||||||:|:.|.:.|...::.|.|:|:|.|..|.||.|..|:.:...:.:|.||.|...||
Mouse   219 RNSRREGLIRARLQGWKVATAPIVGFFDAHVEFNTGWAEPALARIQEDRRRIILPAIDNIKYSTF 283

  Fly   281 EYTPSPLVRGGFNWGLHFRWENLPEGTLKVPEDF--RG----PFRSPTMAGGLFAVNRKYFQHLG 339
            |.........|:||||...:       :..|:|:  ||    |.|:|.|.|..|.|:|:||..:|
Mouse   284 EVQQYASAAHGYNWGLWCMY-------IIPPQDWLDRGDESAPIRTPAMIGCSFVVDREYFGDIG 341

  Fly   340 EYDMAMDIWGGENIEISFRAWQCGGAIKIVPCSRVGHIFRKRRPYTSPDGANTMLKNSLRLAHVW 404
            ..|..|:::|.||||:..|.|||||:::::|||||.||.|.::||.: |......:|:||.|.||
Mouse   342 LLDPGMEVYGAENIELGMRVWQCGGSMEVLPCSRVAHIERTKKPYNN-DIDYYAKRNALRAAEVW 405

  Fly   405 MDQYKDYYLKHEKVPKT---YDYGDISDRLKLRERLQCRDFAWYLKNVYPELHV------PGEES 460
            ||.:|.:......:|.|   .|:||:|:||.|||:|:||.|.|||:|||||:.:      .||..
Mouse   406 MDDFKSHVYMAWNIPMTNPGVDFGDVSERLALREKLKCRSFKWYLENVYPEMRIYNNTLTYGEVR 470

  Fly   461 KKSAAA------------PIFQPWHSRKRNYV-----DTFQLRLTGTELCAAVVAPKVK-----G 503
            ...|:.            .|..|.|......|     ...||...|    :....|..|     |
Mouse   471 NSKASGYCLDQGAEDDDRAILYPCHGMSSQLVRYSAEGLLQLGPLG----STAFLPDSKCLVDDG 531

  Fly   504 FWKKGSSLQLQTCR---RTPNQLWYETEKAEIV-LDKLLCLEA--SGDA----QVTVNKCHEMLG 558
               :|....|:.|.   |...:||..|:...|| .|...|||.  |.||    ::.|.:|    .
Mouse   532 ---RGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRDTGRCLEVEMSKDANFGLRLVVQRC----S 589

  Fly   559 DQQW------RHTRN 567
            .|:|      :|.|:
Mouse   590 GQKWMIRNWIKHARH 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant35ANP_652069.2 pp-GalNAc-T 151..450 CDD:133004 127/308 (41%)
RICIN 489..610 CDD:214672 26/100 (26%)
RICIN 490..609 CDD:238092 25/99 (25%)
Galnt9NP_938048.2 pp-GalNAc-T 155..454 CDD:133004 127/308 (41%)
Ricin_B_lectin 465..593 CDD:279046 32/138 (23%)
RICIN 467..595 CDD:238092 33/138 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.