DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant35A and gly-4

DIOPT Version :9

Sequence 1:NP_652069.2 Gene:Pgant35A / 48775 FlyBaseID:FBgn0001970 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001024216.1 Gene:gly-4 / 180302 WormBaseID:WBGene00001629 Length:589 Species:Caenorhabditis elegans


Alignment Length:640 Identity:229/640 - (35%)
Similarity:327/640 - (51%) Gaps:113/640 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKRLLCKSCGLGTLLVAVVWLLALLF-YSHSLRSSIRSAGWRIDEGNATPRAEL----------S 57
            :.|:| |...:||:| ||:||..|.| |..|..||:|..|     .:..|..:|          :
 Worm     2 LPRML-KMKTVGTVL-AVIWLFGLAFIYVQSTSSSLRPPG-----RHPPPLPQLDPLIPQNPPQN 59

  Fly    58 YQARVTVGCTPNASITTGESPAAPKPPS--------DPEQLELLGVVRNKQDKYIRDIGYKHHAF 114
            .:.|......|..:|...|.....:...        |.|:....|.....:||      ||.::|
 Worm    60 DEIRPKKSAPPIPTINLAEDTTIHERTEKDVTWKTFDVEKFLNKGKWHQGEDK------YKANSF 118

  Fly   115 NALVSNNIGLFRAIPDTRHKVCDRQETTEAENLPQASIVMCFYNEHKMTLMRSIKTVLERTPSYL 179
            |...|:.:...|.|||:|...| |........:...::::.::||.:.:|:|::.:|..::|..|
 Worm   119 NQEASDALNPTRKIPDSREPQC-RDVDYSKVGMQPTTVIITYHNEARSSLLRTVFSVFNQSPEEL 182

  Fly   180 LREIILVDDHSDLPELEFHLHGDLRARLKYDNLRYIKNEQREGLIRSRVIGAREAVGDVLVFLDS 244
            |.||:||||:|...|:     |...|:::  .:..::|.||||||||||.||:.|...||.||||
 Worm   183 LLEIVLVDDNSQDVEI-----GKELAQIQ--RITVLRNNQREGLIRSRVKGAQVARAPVLTFLDS 240

  Fly   245 HIEVNQQWLEPLLRLIKSENATLAVPVIDLINADTFEYT-PSPLVRGGFNWGLHFRWENLPEGTL 308
            |||.||:||||||..|......:..|:||:||.|.|.|. .|..:||||:|.|.||||.:.|...
 Worm   241 HIECNQKWLEPLLARIAENPKAVVAPIIDVINVDNFNYVGASADLRGGFDWTLVFRWEFMNEQLR 305

  Fly   309 KVPEDF-RGPFRSPTMAGGLFAVNRKYFQHLGEYDMAMDIWGGENIEISFRAWQCGGAIKIVPCS 372
            |..... ..|.|||||||||||:::::|..||.||:.|::|||||:|:|||.|||||:::|:|||
 Worm   306 KERHAHPTAPIRSPTMAGGLFAISKEWFNELGTYDLDMEVWGGENLEMSFRVWQCGGSLEIMPCS 370

  Fly   373 RVGHIFRKRRPYTSPDGA-NTMLKNSLRLAHVWMDQYKDYYLKHEKVPKTYDYGDISDRLKLRER 436
            ||||:|||:.|||.|.|: |...||:.|.|.||||:||..|||:....:..::|||:|||.:|:|
 Worm   371 RVGHVFRKKHPYTFPGGSGNVFQKNTRRAAEVWMDEYKAIYLKNVPSARFVNFGDITDRLAIRDR 435

  Fly   437 LQCRDFAWYLKNVYPELHVPGEESKKSAAAPIFQPWHSRKRNYVDTFQLRLTGTELCAAVVAPKV 501
            |||:.|.|||:||||:|.:|.:...||                   ||:::  ..||...:|.  
 Worm   436 LQCKSFKWYLENVYPQLEIPRKTPGKS-------------------FQMKI--GNLCLDSMAR-- 477

  Fly   502 KGFWKKGSSLQLQTCRRT-PNQLWYETEKAEIVLDKL----------LCLEASGDAQ---VTVNK 552
                |:..:..|..|..| .||.|        |.|:|          |||:.|.:.:   ||:.|
 Worm   478 ----KESEAPGLFGCHGTGGNQEW--------VFDQLTKTFKNAISQLCLDFSSNTENKTVTMVK 530

  Fly   553 CHEMLGDQQWRHTRNANSPVYNMAKGTCLRAAAPTTGALISLDLCSKSNGAGGSW 607
            |..:..|     |.......:....|.||                :.:.|:||.|
 Worm   531 CENLRPD-----TMVVEKNGWLTQGGKCL----------------TVNQGSGGDW 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant35ANP_652069.2 pp-GalNAc-T 151..450 CDD:133004 149/301 (50%)
RICIN 489..610 CDD:214672 30/133 (23%)
RICIN 490..609 CDD:238092 30/132 (23%)
gly-4NP_001024216.1 pp-GalNAc-T 154..449 CDD:133004 149/301 (50%)
RICIN 469..582 CDD:238092 30/131 (23%)
Ricin_B_lectin 469..580 CDD:279046 30/131 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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