DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant35A and galnt15

DIOPT Version :9

Sequence 1:NP_652069.2 Gene:Pgant35A / 48775 FlyBaseID:FBgn0001970 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_002932836.2 Gene:galnt15 / 100489899 XenbaseID:XB-GENE-982198 Length:613 Species:Xenopus tropicalis


Alignment Length:667 Identity:204/667 - (30%)
Similarity:312/667 - (46%) Gaps:126/667 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLCKSCGL------------GTLLVAVVWLLALL---------------FYSHSLRSSIRSAGW- 43
            ||.|.|.|            |.|||.|:  :|:|               :|...      ..|| 
 Frog     2 LLRKRCRLLLCQLQVVMLMFGLLLVLVI--VAILNPEAQREDKPQDFQYYYEGG------GHGWA 58

  Fly    44 -------RIDEGN------ATPRAELSYQARVTVGCTPNASITTGESPAAPKPPSDPEQLELLGV 95
                   |.:|.|      .:|.:.|..:..:.:|.                  |.||:  ....
 Frog    59 GEDLVQERAEESNHFKVELLSPLSSLREEGLIAIGM------------------SGPER--NFDK 103

  Fly    96 VRNKQDKYIRDIGYKH---------------HAFNALVSNNIGLFRAIPDTRHKVCDRQETTEAE 145
            |..|..:.::.:..|:               :.|:..||.||.|.|.|||.||..|.:|  ...|
 Frog   104 VPRKMYRIVKQLKRKNEETSPSLVLRSELNTNGFDEEVSKNIPLHRIIPDGRHPECLQQ--NYGE 166

  Fly   146 NLPQASIVMCFYNEHKMTLMRSIKTVLERTPSYLLREIILVDDHSDLPELEFHLHGDLRARL-KY 209
            .||.||:::||:||...||:|::.:||:.:|...|:|||||||.|.    :.||...|...: :.
 Frog   167 KLPIASVIICFHNEGWSTLLRTVHSVLDNSPRTFLKEIILVDDLSH----QEHLKSALSEYISRI 227

  Fly   210 DNLRYIKNEQREGLIRSRVIGAREAVGDVLVFLDSHIEVNQQWLEPLLRLIKSENATLAVPVIDL 274
            ..::.|::.:|.|:|..|::||..|.|:||:|:|||.|.:..||||||..|......:..||||.
 Frog   228 GGVKLIRSNKRLGVIGGRMLGAARATGEVLIFMDSHCECHPGWLEPLLSRIMHNRNRIVSPVIDF 292

  Fly   275 INADTFEYTPSPLVRGG-FNWGLHFRWENLPEGTLKVPEDFRGPFRSPTMAGGLFAVNRKYFQHL 338
            |:..||||:.|.|::.| |:|.|.|.|..|||...||.:....|||||.:.|.:.|.:|.|||::
 Frog   293 IDWKTFEYSHSSLLQQGVFDWKLDFHWVPLPEHEEKVRQSPIIPFRSPVIPGYVLASDRHYFQNI 357

  Fly   339 GEYDMAMDIWGGENIEISFRAWQCGGAIKIVPCSRVGHIFRKRRPYTSPDGANTMLKNSLRLAHV 403
            |.:|..::.||.|..|:|.|.|.|||:::|||||||||.::....:.|....: :|::.:|.|.:
 Frog   358 GGFDTGINSWGVETTELSIRVWLCGGSVEIVPCSRVGHAYQNHTMHNSVQNED-VLRSKVRTAEL 421

  Fly   404 WMDQYKDYYLKH--EKVPKTYDYGDISDRLKLRERLQCRDFAWYLKNVYPELHVPGEESKKSAAA 466
            |||.||..:.::  ..:.......||::..:||:||.|:.|.|:|.|||||:::  ..|...::.
 Frog   422 WMDSYKAIFYRNVGNSLLNRIQESDINEHEQLRQRLGCKRFQWFLANVYPEINM--STSTLESSG 484

  Fly   467 PIFQPWHSRKRNYVDTFQLRLTGTELCAAVVAPKVKGFWKKGSSLQLQTCRRTPNQLWYETEKAE 531
            .:|..          .|.|.:|.|......|.|           ::|.:|....||::......|
 Frog   485 QLFNA----------GFGLCMTHTFRERLFVTP-----------VKLSSCDENGNQVFEYNSVNE 528

  Fly   532 IVLDKL-LCLEASGDAQVTVNKC--HEMLGDQQWRHTRNANSPVYNMAKGTCLRAAAPTTGALIS 593
            |.|..: |||....: |::...|  .:....:.| |...|.| :.::..|.|:.|..  |||..|
 Frog   529 IRLTSVPLCLTVRHE-QISFENCTTSKPAASRLW-HFGQAGS-ITHIPTGKCIEAMG--TGARKS 588

  Fly   594 LDLCSKSNGAGGSWDIV 610
            |.|...|:.....|.::
 Frog   589 LYLNPCSDHRNQIWKML 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant35ANP_652069.2 pp-GalNAc-T 151..450 CDD:133004 120/302 (40%)
RICIN 489..610 CDD:214672 30/123 (24%)
RICIN 490..609 CDD:238092 30/121 (25%)
galnt15XP_002932836.2 pp-GalNAc-T 172..470 CDD:133004 120/302 (40%)
Ricin_B_lectin 482..602 CDD:395527 33/145 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D367513at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.