DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant35A and galnt18

DIOPT Version :9

Sequence 1:NP_652069.2 Gene:Pgant35A / 48775 FlyBaseID:FBgn0001970 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_031756257.1 Gene:galnt18 / 100488804 XenbaseID:XB-GENE-959491 Length:608 Species:Xenopus tropicalis


Alignment Length:545 Identity:183/545 - (33%)
Similarity:268/545 - (49%) Gaps:84/545 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 AAPKPPSDPEQ------LELLGVVRNKQDKYIRDIGYKHHAFNALVSNNIGLFRAIPDTRHKVCD 137
            |.||...|.|.      .:..|...:.:::.:....::::.:||.:|:.:.|.|.:||.|...| 
 Frog    80 APPKMEEDVEPFTDSILFKTWGQDLSPENRRVAFKQFQYYGYNAYLSDRLPLDRPLPDFRPAGC- 143

  Fly   138 RQETTEAENLPQASIVMCFYNEHKMTLMRSIKTVLERTPSYLLREIILVDDHSDLPELEFHLH-- 200
             :..|..|:|||.|:|..|.||....::|||.:.:.|||:.||:|||||||:|...||...|.  
 Frog   144 -KNLTFPEDLPQISVVFIFVNEAFSVILRSINSAINRTPAKLLKEIILVDDNSSNEELRTKLAQY 207

  Fly   201 -GDLRARLKYDNLRYIKNEQREGLIRSRVIGAREAVGDVLVFLDSHIEVNQQWLEPLLRLIKSEN 264
             .|...| |...::.:::.::||||||||.|.|.|...|:...|||||.|..|.||:|..||.:.
 Frog   208 VEDFNKR-KPGFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDSHIEFNVGWAEPVLLRIKEDR 271

  Fly   265 ATLAVPVIDLINADTFEYTPSPLVRGGFNWGLHFRWENLPEGTLKVPEDFRGPFRSPTMAGGLFA 329
            ..:..|..|.||.|.||....||...||:|.|..|:.|.|:...| .|:...|.|:|::. |.|.
 Frog   272 TRVISPSFDNINYDDFELEQYPLNAQGFDWQLWCRYLNPPKSWFK-QENKTAPIRTPSLI-GCFI 334

  Fly   330 VNRKYFQHLGEYDMAMDIWGGENIEISFRAWQCGGAIKIVPCSRVGHIFRKRRPYTSPDGANTML 394
            |:|.||:.:|..|..|||:||||:|::.|.|||||:::::||||:.||.|..:|||. ..|..:.
 Frog   335 VDRLYFEEIGLLDEGMDIYGGENVELAVRVWQCGGSVEVIPCSRIAHIERAHKPYTG-QLAEHVR 398

  Fly   395 KNSLRLAHVWMDQYKDYYLKHEKVPKT---YDYGDISDRLKLRERLQCRDFAWYLKNVYPELHVP 456
            :|:||:|.||||::|.:......:|:.   .|:||||.|..||::|||:.|.|||.:||||:...
 Frog   399 RNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDFGDISSRKALRKKLQCKTFRWYLVSVYPEMRTY 463

  Fly   457 GE-----ESKKSAAA-------------PIFQPWHS---RKRNYVDTFQLRLTGTE--------- 491
            .:     ..|.|..|             ||....|.   :...|..|.||.:....         
 Frog   464 SDIIAYGSLKNSVKAGLCLDQGPDTDNTPIVYLCHGYVPQSIYYTSTQQLHIGALSPTIDDVDIK 528

  Fly   492 ------------LCAAVVAPKVKGFW--KKGSSLQLQTCRRTPNQLWYETEKAEIV--LDKLLCL 540
                        .|....|.::|.:|  .:|..:|.:..:|.          .|||  :|||...
 Frog   529 CLVDVNSRPRLIECNYAKAKRMKLYWDFNQGGPIQNKKSKRC----------LEIVENIDKLYGY 583

  Fly   541 EASGDAQVTVNKCHEMLGDQQWRHT 565
            |      |.:..|    ..|:|..|
 Frog   584 E------VVLQNC----SGQRWTIT 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant35ANP_652069.2 pp-GalNAc-T 151..450 CDD:133004 130/304 (43%)
RICIN 489..610 CDD:214672 19/102 (19%)
RICIN 490..609 CDD:238092 19/101 (19%)
galnt18XP_031756257.1 pp-GalNAc-T 156..457 CDD:133004 130/304 (43%)
RICIN 470..597 CDD:238092 28/146 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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