DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant35A and galnt6.2

DIOPT Version :9

Sequence 1:NP_652069.2 Gene:Pgant35A / 48775 FlyBaseID:FBgn0001970 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_031753046.1 Gene:galnt6.2 / 100486937 XenbaseID:XB-GENE-1000674 Length:623 Species:Xenopus tropicalis


Alignment Length:558 Identity:206/558 - (36%)
Similarity:295/558 - (52%) Gaps:85/558 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 CTPNASITTGESPAAPKPPSDPEQ--LELLGVVRN---KQDKYIRDIGYKHHAFNALVSNNIGLF 125
            |.|.........|...:||.||..  .:..|.::|   :::...::.|:..|.|||..|:.|.|.
 Frog    87 CLPGYYTPAELKPFMERPPQDPNSPGADGKGFIKNIWTEEEVEEKEKGFDKHCFNAFASDRISLH 151

  Fly   126 RAI-PDTRHKVCDRQETTEAENLPQASIVMCFYNEHKMTLMRSIKTVLERTPSYLLREIILVDDH 189
            ||: ||||...|..|:.....:||..||::.|:||...||:|::.:||..:|:.||:|||||||.
 Frog   152 RALGPDTRPLECIEQKFKRCPSLPTTSIIIVFHNEAWSTLLRTVYSVLYTSPAILLKEIILVDDA 216

  Fly   190 SDLPELEFHLHGDLRARLKYDNLRYIK---NEQREGLIRSRVIGAREAVGDVLVFLDSHIEVNQQ 251
            |:...|:..|...::|      |:.:|   .::|:|||.:|::||..|.|:||.|||:|.|....
 Frog   217 SEDEYLKEKLDDYVKA------LQIVKIARQKERKGLITARLLGASIATGEVLTFLDAHCECFHG 275

  Fly   252 WLEPLLRLIKSENATLAVPVIDLINADTFEYTPSPL------VRGGFNWGLHFRWENLPEGTLKV 310
            ||||||..:..::..:..|.|..||.:|||: ..|:      .||.|:|.|.|.||.:|....|.
 Frog   276 WLEPLLSRVAEDHTAVVSPDITAINYNTFEF-GKPVQQGKMNSRGNFDWSLAFNWEAIPAADEKQ 339

  Fly   311 PEDFRGPFRSPTMAGGLFAVNRKYFQHLGEYDMAMDIWGGENIEISFRAWQCGGAIKIVPCSRVG 375
            .:|...|.::||.|||||::::.||:|:|.||..|:||||||:|:|||.|||||.::|:|||.||
 Frog   340 RKDETYPIKTPTFAGGLFSISKAYFEHIGSYDEEMEIWGGENVEMSFRVWQCGGKLEIIPCSVVG 404

  Fly   376 HIFRKRRPYTSPDGANTMLKNSLRLAHVWMDQYKD-YYLKHE---KVPKTYDYGDISDRLKLRER 436
            |:||.:.|:|.|.|...:|:|.:|||.||||.||. ||.::|   |:.|...:||||.||||:..
 Frog   405 HVFRTKSPHTFPKGTQVILRNQVRLAEVWMDDYKVLYYRRNEQAAKIAKEKSFGDISKRLKLKAD 469

  Fly   437 LQCRDFAWYLKNVYPELHVP---------------------GEESKKSAAAPIFQPWHSRKRN-- 478
            |||::|.|||:|:|||:.||                     ||.:...:..||..|.|....|  
 Frog   470 LQCKNFTWYLENIYPEMFVPDRDPTYYGAIKNEGTQNCIDVGENNNYGSQLPIMYPCHGMGGNQY 534

  Fly   479 --YVDTFQLRLT-GTELC---------AAVVAPKVKGFWKKGSSLQLQTCRRTPNQLWYETEKAE 531
              |....:||.. .|:||         ..:|..:.||          |......|:.|      |
 Frog   535 FEYSTHKELRHNLKTQLCLCSKYEPGPVKLVDCQYKG----------QNTTVPGNEEW------E 583

  Fly   532 IVLDKL-------LCLEASGDAQVTVNKCHEMLGDQQW 562
            ...|:|       :||.|.||...|. :|:....||.|
 Frog   584 FTKDRLIRNVGSNMCLTAQGDHPSTA-ECNPDDIDQLW 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant35ANP_652069.2 pp-GalNAc-T 151..450 CDD:133004 142/311 (46%)
RICIN 489..610 CDD:214672 22/90 (24%)
RICIN 490..609 CDD:238092 22/89 (25%)
galnt6.2XP_031753046.1 OppC_N 1..>27 CDD:403960
pp-GalNAc-T 178..483 CDD:133004 142/311 (46%)
Ricin_B_lectin 496..620 CDD:395527 31/140 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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