DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC3 and SCARF2

DIOPT Version :9

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_699165.3 Gene:SCARF2 / 91179 HGNCID:19869 Length:871 Species:Homo sapiens


Alignment Length:196 Identity:49/196 - (25%)
Similarity:64/196 - (32%) Gaps:55/196 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 AKTRMAGAGPPNASHPIDL---------DSYVVYEERVRWDNI------QV--CCPGYR----TI 88
            |:.|.|| |||:...|..|         |:....|...|..|:      ||  ||.|:|    ..
Human    12 ARRRGAG-GPPSPLLPSLLLLLLLWMLPDTVAPQELNPRGRNVCRAPGSQVPTCCAGWRQQGDEC 75

  Fly    89 LFGFCEPVCQEACPAHSYCAEPDRCHCQRGYEPSHHHTTGHQLICRPVCQGGCPEHSH------- 146
            ....||.  ...|..:..|..|..|.|:.||..::..|...:....|.|:..|..|.|       
Human    76 GIAVCEG--NSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKELCSCHPHGQCEDVT 138

  Fly   147 --CVAH---------NECECWPGFKDASSWFSLSLRCE----------RVQCGHEQRFDPGRRAC 190
              |..|         :.|:|..|.....|.   :.|||          ...|....|.||...||
Human   139 GQCTCHARRWGARCEHACQCQHGTCHPRSG---ACRCEPGWWGAQCASACYCSATSRCDPQTGAC 200

  Fly   191 V 191
            :
Human   201 L 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 31/139 (22%)
SCARF2NP_699165.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 4/8 (50%)
PHA03247 <534..871 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..871
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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