DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC3 and Megf6

DIOPT Version :9

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_075244.1 Gene:Megf6 / 65049 RGDID:621188 Length:1574 Species:Rattus norvegicus


Alignment Length:144 Identity:39/144 - (27%)
Similarity:52/144 - (36%) Gaps:50/144 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 CPGYRTILFGFCEPVCQEACPAHSY---CAEPDRCHCQRGYEPSHHHTTG-----------HQLI 132
            ||.      |:....||.:|.:.::   |.|  .|.|::|  .|.||.||           |   
  Rat  1110 CPA------GWTGDKCQSSCVSGTFGVHCEE--HCACRKG--ASCHHVTGACFCPPGWRGPH--- 1161

  Fly   133 CRPVCQGG-----------CPEHSHCVAHN---ECECWPGF-----KDASSWFSLSLRCERV-QC 177
            |...|..|           ||.::.|  |:   ||.|.|||     :.|....:....||.: ||
  Rat  1162 CEQACPRGWFGEACAQRCLCPTNASC--HHVTGECRCPPGFTGLSCEQACQPGTFGKDCEHLCQC 1224

  Fly   178 -GHEQRFDPGRRAC 190
             |.....||....|
  Rat  1225 PGETWACDPASGVC 1238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 37/141 (26%)
Megf6NP_075244.1 EMI 42..112 CDD:284877
FXa_inhibition 127..162 CDD:291342
vWFA <154..202 CDD:294047
vWFA <237..285 CDD:294047
vWFA <284..325 CDD:294047
FXa_inhibition 338..373 CDD:291342
vWFA <371..410 CDD:294047
vWFA <413..452 CDD:294047
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1555..1574
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.