DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC3 and pear1

DIOPT Version :10

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_700533.4 Gene:pear1 / 571812 ZFINID:ZDB-GENE-091230-1 Length:1020 Species:Danio rerio


Alignment Length:129 Identity:36/129 - (27%)
Similarity:48/129 - (37%) Gaps:27/129 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VYEERVRWD--NIQVCCPGYRTILFGFCEPVCQEACPAHSYCAEPDRCHCQRGYE--------PS 122
            :|.:.|:.|  ....||||:.... ..|.|.|.:.| .|..|..||||.|:.|:.        ..
Zfish    76 LYRQVVKMDYRRRYQCCPGFYESR-NKCVPRCTKEC-VHGRCVAPDRCQCEMGWRGDDCSSSCDG 138

  Fly   123 HHHTTGHQLICRPVCQGGCPEHSHC-VAHNECECWPGFKDAS-------SWFSLSLRCERVQCG 178
            .|...|    ||.:|:  |.....| |....|:|..|:....       .||....| :..|||
Zfish   139 QHWGPG----CRRLCE--CQNGGECDVLTGNCQCPAGYTGQHCHDPCPVKWFGQGCR-QECQCG 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 None
pear1XP_700533.4 EMI 28..97 CDD:462204 7/20 (35%)
Laminin_EGF 411..451 CDD:395007
Blue background indicates that the domain is not in the aligned region.

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