DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC3 and Dkk4

DIOPT Version :9

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001102802.1 Gene:Dkk4 / 502097 RGDID:1563172 Length:221 Species:Rattus norvegicus


Alignment Length:112 Identity:29/112 - (25%)
Similarity:39/112 - (34%) Gaps:35/112 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 EACPAHSYCAEPDRCHCQRGYEPSHHHTTGHQLICRPVCQGG--CPEHSHCVAHNECECWPGFKD 161
            |:|...|.|. |..| |.|     |..|.    ||:||...|  |....|             ||
  Rat   143 ESCLRTSDCG-PGLC-CAR-----HFWTK----ICKPVLLEGQVCSRRGH-------------KD 183

  Fly   162 ASSWFSLSLRCERVQCGHEQRFDPGRRACVQIEMSMEELMQRVAERL 208
            .:....:..||:   ||      ||.....|:..:.:....||.:|:
  Rat   184 TAQAPEIFQRCD---CG------PGLSCRSQVTGNRQHTRLRVCQRI 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 29/112 (26%)
Dkk4NP_001102802.1 Dickkopf_N 41..91 CDD:282549
Prokineticin <145..202 CDD:148298 24/89 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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