DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC3 and Scarf1

DIOPT Version :9

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001004157.2 Gene:Scarf1 / 380713 MGIID:2449455 Length:820 Species:Mus musculus


Alignment Length:128 Identity:37/128 - (28%)
Similarity:49/128 - (38%) Gaps:38/128 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 CCPGYR------TILFGFCEPVCQ--EACPAHSYCAEPDRCHCQRGYE--------PSHHHTTGH 129
            ||||:|      ||      |:|:  :||.....|.:|..|.|:.|:.        |..:  .||
Mouse    44 CCPGWRQKDQECTI------PICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQY--WGH 100

  Fly   130 QLICRPVCQGGCPEHSHC-VAHNECECWPGFKDASSWFSLSLRCE-RVQCGHEQRFDPGRRAC 190
            .  ||..|.  |.....| .|..:|:|.|.:     |..|   || ...||...:.||....|
Mouse   101 D--CRETCP--CHPRGQCEPATGDCQCQPNY-----WGRL---CEFPCTCGPHGQCDPKTGLC 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 33/124 (27%)
Scarf1NP_001004157.2 PHA03247 <541..781 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..685
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..820
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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