DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC3 and NimB5

DIOPT Version :10

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_609692.3 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster


Alignment Length:349 Identity:65/349 - (18%)
Similarity:120/349 - (34%) Gaps:96/349 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  2983 KKKHRRSIEYGNMTSILPSYHNIT------NNNSVMRLE-YCIDCSQDASSITSKSYKVTNWINE 3040
            :|||:|.    .::::|...||.:      |||:|...: :.:.|:...||              
  Fly     7 QKKHKRK----RLSAVLDKLHNGSGTVVNHNNNNVGEAQNFKVKCTDSRSS-------------- 53

  Fly  3041 IFEHFFNTENQGKQDQEDRKVNPYLKHHKRPTKTPFHIANCFRTNSADNLNTI---TCYEQHGL- 3101
                       .:...||  |.||       :.:|....:..|.:..|..|.:   ..::||.| 
  Fly    54 -----------AEDSAED--VFPY-------SASPRISISPLRLSEVDENNPLQQRATHQQHALP 98

  Fly  3102 ---SYVFPHNTSNITGITEDHYSSCYPIEYNGLLTTACAGTNSSYMY--TPYIRPV---NYLDQL 3158
               ....|......|.:.........|::     .:.....:..|:|  ..|..|:   |||.:.
  Fly    99 QDQQLPSPSQLPRQTKLDASPQQPALPLQ-----PSQIKQEDQQYLYKQLQYFNPLALFNYLPEP 158

  Fly  3159 NGTLTLLLVAPTVVRN----------------IASGLRNLFFKKKPEQQAHEVSTLEH--SQIDK 3205
            ...|...|:..||::.                ::.| :.|..|::...........||  .....
  Fly   159 TKLLYQDLLVTTVIKEEPQLADSPPPDSPLPPVSIG-QKLLLKREDMPDIRRSPAFEHLNGHGPP 222

  Fly  3206 QFH-DLKQTVQEYRQLADNRNSGNWLDNIFKDIEEDFNVFLSTVNPSRT--------FYYQLCER 3261
            .|: ::...|:|....:|..........:| .:::.....:::.:.|||        :..::|:|
  Fly   223 GFNLNVSPVVEEMPPGSDVAYMCPVCGQLF-SLQDRLAKHMASRHKSRTGATDITKSYMCEVCQR 286

  Fly  3262 IAALSDELEESRHILQH---KLYS 3282
            ..|.||.|  :||:..|   |.||
  Fly   287 SFARSDML--TRHMRLHTGVKPYS 308

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