DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC3 and Ccbe1

DIOPT Version :10

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_848908.1 Gene:Ccbe1 / 320924 MGIID:2445053 Length:408 Species:Mus musculus


Alignment Length:186 Identity:42/186 - (22%)
Similarity:62/186 - (33%) Gaps:63/186 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 CCPGYRTILFGFCEP----VCQEACPAHSYCAE---PDRCHCQRGYEPSHHHTTGHQLICRPVCQ 138
            ||.||:.:| |.|.|    :|.:| |....|.:   ...|.|..||   .:....||...||.|.
Mouse    75 CCKGYKFVL-GQCIPEDYDICAQA-PCEQQCTDNFGRVLCTCYPGY---RYDRERHQKRERPYCL 134

  Fly   139 GGCPEHSHCVAHN---------------ECECWPGF---KDASSWFSLSLRCER-----VQCGHE 180
                :...|...|               .|||..|:   .|..:       |.|     ...|||
Mouse   135 ----DIDECATSNTTLCAHICINTMGSYHCECREGYILEDDGRT-------CTRGDKYPNDTGHE 188

  Fly   181 QR----------------FDPGRRACVQIEMSMEELMQRVAERLAKGLEAEEEAAN 220
            ::                |...::..:|::..|..|....|| |.|.:..::..|:
Mouse   189 EKSENEVKAGTCCATCKEFSQMKQTVLQLKQKMALLPNNAAE-LGKYVNGDKVLAS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 None
Ccbe1NP_848908.1 EGF_CA 135..176 CDD:214542 7/47 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..335
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..408
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.