DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC3 and Pear1

DIOPT Version :9

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001128431.1 Gene:Pear1 / 295293 RGDID:1305653 Length:1033 Species:Rattus norvegicus


Alignment Length:128 Identity:36/128 - (28%)
Similarity:54/128 - (42%) Gaps:35/128 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 WDNIQVCCPG---YRTILFGFCEPVCQEACPAHSYCAEPDRCHCQRGYEPSHHHTTGHQLICRPV 136
            |::...|...   |||:   :.:.|..::.|         |..|..||    :.::|   .|.|:
  Rat    57 WEDPHTCAQPMVVYRTV---YRQVVKMDSRP---------RLQCCGGY----YESSG---ACVPL 102

  Fly   137 CQGGCPEHSHCVAHNECECWPGFK--DASS------WFSLSLRCERV-QCGHEQRFDPGRRAC 190
            |...| .|..|||.|.|:|.||::  |.||      |   ..:|:|: .||:....||....|
  Rat   103 CAQEC-VHGRCVAPNRCQCAPGWRGDDCSSECAPGMW---GPQCDRLCLCGNSSSCDPRSGVC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 34/115 (30%)
Pear1NP_001128431.1 EMI 25..93 CDD:284877 11/51 (22%)
EGF_CA 535..580 CDD:304395
Laminin_EGF 620..665 CDD:278482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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