DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC3 and STAB1

DIOPT Version :10

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_005265030.1 Gene:STAB1 / 23166 HGNCID:18628 Length:2595 Species:Homo sapiens


Alignment Length:264 Identity:56/264 - (21%)
Similarity:76/264 - (28%) Gaps:115/264 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CQKNISVK-----------YQVPVAKTRMAGAGPPNASHPIDLDSY-----VVYEERVRWDNIQV 80
            |:|.:..|           ::.|      .||..|...|...||..     .|.:|..|....|.
Human    91 CRKQVVQKACCPGYWGSRCHECP------GGAETPCNGHGTCLDGMDRNGTCVCQENFRGSACQE 149

  Fly    81 C---------CPGYRTILFGFCE------------------------PVCQE-ACPAHSYC-AEP 110
            |         |....:.:.|.|.                        ||||| .||.::.| ||.
Human   150 CQDPNRFGPDCQSVCSCVHGVCNHGPRGDGSCLCFAGYTGPHCDQELPVCQELRCPQNTQCSAEA 214

  Fly   111 DRCHCQRGYE-----------------------------------PSHHHTTGHQLICRP--VCQ 138
            ..|.|..||.                                   |.::|  |..::|.|  .|.
Human   215 PSCRCLPGYTQQGSECRAPNPCWPSPCSLLAQCSVSPKGQAQCHCPENYH--GDGMVCLPKDPCT 277

  Fly   139 ---GGCPEHSHCVAHNE-----CECWPGFKDASS-------WFSLSLRCER-VQCGHEQRFDPGR 187
               ||||.:|....:.:     |.|.||....:|       .|.....|:| ..|   |....|:
Human   278 DNLGGCPSNSTLCVYQKPGQAFCTCRPGLVSINSNASAGCFAFCSPFSCDRSATC---QVTADGK 339

  Fly   188 RACV 191
            .:||
Human   340 TSCV 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 None
STAB1XP_005265030.1 Fasciclin 393..490 CDD:470649
FAS1 496..643 CDD:441906
EGF_3 831..859 CDD:463759
EGF_3 865..902 CDD:463759
EGF_3 914..945 CDD:463759
EGF_3 951..987 CDD:463759
Fasciclin 999..1120 CDD:396845
Fasciclin 1139..1241 CDD:470649
EGF_3 1424..1453 CDD:463759
EGF_3 1459..1495 CDD:463759
EGF_3 1501..1538 CDD:463759
EGF_3 1544..1581 CDD:463759
Fasciclin 1606..1710 CDD:396845
Fasciclin 1736..1866 CDD:396845
EGF_Lam <1992..2021 CDD:214543
EGF_3 2095..2130 CDD:463759
EGF_3 2136..2173 CDD:463759
Link_Domain 2208..2300 CDD:470631
Blue background indicates that the domain is not in the aligned region.

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