DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC3 and Stab2

DIOPT Version :10

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_619614.1 Gene:Stab2 / 192188 MGIID:2178743 Length:2559 Species:Mus musculus


Alignment Length:119 Identity:35/119 - (29%)
Similarity:47/119 - (39%) Gaps:27/119 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FCE------PVCQEACPAHSYCAEPDRCHCQRGYEPSHHHTTGHQLICRPV--CQ---GGCPEHS 145
            ||:      |||..||..|:.|.|.:.|.|...||       |..:.|..|  |:   |||.:.:
Mouse  2048 FCDAPTVVIPVCIPACSMHATCMENNTCVCNLNYE-------GDGITCTVVDFCKQNNGGCAKVA 2105

  Fly   146 HCVAHN---ECECWPGFK-DASSWFSLSLRCERVQCG-HE----QRFDPGRRAC 190
            .|....   .|.|..|:| |..|...:......|..| ||    :...||::.|
Mouse  2106 KCSQKGTQVSCSCQKGYKGDGHSCTEIDPCANGVNGGCHEHATCRMTGPGKQKC 2159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 None
Stab2NP_619614.1 EGF_3 254..283 CDD:463759
EGF_3 334..369 CDD:463759
Fasciclin 390..512 CDD:396845
Fasciclin 533..661 CDD:396845
EGF_3 844..872 CDD:463759
EGF_3 881..916 CDD:463759
EGF_3 927..959 CDD:463759
EGF_3 965..1001 CDD:463759
Fasciclin 1018..1137 CDD:396845
Fasciclin 1156..1273 CDD:396845
EGF_3 1482..1518 CDD:463759
EGF_3 1524..1560 CDD:463759
EGF_3 1566..1602 CDD:463759
Fasciclin 1628..1733 CDD:396845
Fasciclin 1758..1889 CDD:396845
Laminin_EGF 1978..2022 CDD:395007
EGF_3 2094..2129 CDD:463759 10/34 (29%)
EGF_3 2135..2172 CDD:463759 7/25 (28%)
Link_Domain 2206..2297 CDD:470631
FAS1 2363..2452 CDD:214719
Interaction with TMSB4X. /evidence=ECO:0000250 2510..2520
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2514..2559
Blue background indicates that the domain is not in the aligned region.

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