DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC3 and dsl-6

DIOPT Version :10

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_502148.2 Gene:dsl-6 / 178063 WormBaseID:WBGene00001108 Length:303 Species:Caenorhabditis elegans


Alignment Length:119 Identity:31/119 - (26%)
Similarity:45/119 - (37%) Gaps:35/119 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 GYRTIL------FG-----FCEPVCQEACPAHSYCAEPDRCHCQRGYEPSHHHTTG---HQLICR 134
            |.|.|:      ||     ||:.:.|.   .|.     .||: .||.....:..||   .::|..
 Worm   114 GLRIIIECDENWFGEKCDVFCDNIEQR---LHG-----KRCN-YRGVPSCLNMFTGAGCMKMITP 169

  Fly   135 PVCQGGCPEHSHCVAHNE---CECWPGFK-DASSWF------SLSLRCERVQCG 178
            ..|  .|..:..||...|   |||..||| |.....      :::::.|.:.||
 Worm   170 MDC--SCKNNGKCVDSAETPICECTRGFKGDTCEEMHETIKAAINVQQEEIGCG 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 None
dsl-6NP_502148.2 DSL 101..163 CDD:128366 15/57 (26%)
EGF_CA <174..201 CDD:238011 11/26 (42%)

Return to query results.
Submit another query.