DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment NimC3 and pqn-25

DIOPT Version :9

Sequence 1:	NP_524928.2	Gene:	NimC3 / 48772	FlyBaseID:	FBgn0001967	Length:	224	Species:	Drosophila melanogaster
Sequence 2:	NP_741140.1	Gene:	pqn-25 / 175759	WormBaseID:	WBGene00004114	Length:	672	Species:	Caenorhabditis elegans

Alignment Length:	199	Identity:	41/199 - (20%)
Similarity:	62/199 - (31%)	Gaps:	64/199 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly    27 ITNG-HCQKNISVKYQVPVAKTRMAGAGPPNASHPIDLDSYVVYEERVRWDNIQVCCPGYRTILF 90
            |:|| :||.. :|.|..........|.....:|..||        ..|..:.:..|...|| :::
Worm   213 ISNGLNCQLG-TVSYNSQCITLASPGQNCQTSSQCID--------NSVCMNQMCTCNNNYR-LVY 267

  Fly    91 GFCEP----VCQ-----------------EACPAHSYC-----AEPDRCHCQRG--------YEP 121
            |:|.|    :||                 |.|.|:..|     .....|.|..|        ...
Worm   268 GYCVPITSSICQQTQTLVNNQCVLLSIVGETCIANQQCVGGAMCNSGTCQCTNGATAMYGYCISS 332

  Fly   122 SHHHTTGHQLICRPVCQ------GGCPEHSHCVAHNECE---CWPGFKDASSWFSLSLRCERV-- 175
            |......:|:....:|.      |.|.....|:.:..|.   |      .|::.|:|....:|
Worm   333 SSSSCNSNQVSINGMCYNTVQVGGSCSFSQQCLNNAVCTNNIC------VSTFCSVSCSTNQVCI 391

  Fly   176 --QC 177
              ||
Worm   392 SNQC 395

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
NimC3	NP_524928.2	MSC	85..>212	CDD:286487	28/140 (20%)
pqn-25	NP_741140.1	EB	160..211	CDD:279949
		EB	219..270	CDD:279949	13/60 (22%)
		EB	278..329	CDD:279949	9/50 (18%)
		EB	341..>376	CDD:279949	7/40 (18%)
		EB	384..435	CDD:279949	3/12 (25%)
		EB	450..496	CDD:279949
		EB	504..555	CDD:279949
		EB	563..614	CDD:279949
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1218
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900