DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC3 and Dkk3

DIOPT Version :9

Sequence 1:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_612528.2 Gene:Dkk3 / 171548 RGDID:621846 Length:348 Species:Rattus norvegicus


Alignment Length:153 Identity:32/153 - (20%)
Similarity:51/153 - (33%) Gaps:60/153 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VCCPGYRTILFGFCEPVCQEACPAH----------SYCAEP----DRCHCQRGYEPSHHHTTGHQ 130
            :||...|.:||..|.|:..|....|          ::..||    |||.|..|            
  Rat   218 LCCAFQRGLLFPVCTPLPVEGELCHDPTSQMLDLITWELEPEGALDRCPCASG------------ 270

  Fly   131 LICRPVCQGGCPEHSHCVAHNECECWPGFKDASSWFSLSLRCERVQCGHEQRFDPGRRA------ 189
            |:|:|        |||.:.:   .|.|.|..:..              |.:.....|.|      
  Rat   271 LLCQP--------HSHSLVY---MCKPAFVGSHD--------------HNEESQLPREALDDYED 310

  Fly   190 ---CVQIEMSMEELMQRVAERLA 209
               ..::...:|:|.:.:|:.:|
  Rat   311 VGFIGEVRQELEDLERSLAQEMA 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC3NP_524928.2 MSC 85..>212 CDD:286487 30/148 (20%)
Dkk3NP_612528.2 Dickkopf_N 147..196 CDD:282549
Prokineticin <208..273 CDD:148298 17/66 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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