DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPM1 and Nlp

DIOPT Version :10

Sequence 1:NP_002511.1 Gene:NPM1 / 4869 HGNCID:7910 Length:294 Species:Homo sapiens
Sequence 2:NP_524557.1 Gene:Nlp / 43560 FlyBaseID:FBgn0016685 Length:152 Species:Drosophila melanogaster


Alignment Length:195 Identity:51/195 - (26%)
Similarity:87/195 - (44%) Gaps:57/195 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    19 FGCELKADKD-YHFKVDNDENEHQ-LSLRTVSLGAGAKD-ELHIVEAEAMNYEGSPIKVTLATLK 80
            :|..|.|:.| ..:.||.|....| |.::.:.|||.||: |.::||   :|.....:::.:|.||
  Fly     7 YGVTLTAESDSVTWDVDEDYARGQKLVIKQILLGAEAKENEFNVVE---VNTPKDSVQIPIAVLK 68

Human    81 ----MSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGK 141
                .:|.|.|.....::|    .:|..|||||:|.|.::             ::||:::     
  Fly    69 AGETRAVNPDVEFYESKVT----FKLIKGSGPVYIHGHNI-------------KDDVEVV----- 111

Human   142 RSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQK 206
                                     |.||||:|||..:|.:||..:::|.::.:.....|||.:|
  Fly   112 -------------------------DMEEDDEEDDVAEDEEDEHPKKRAKIENAADGKNAKNNKK 151

Human   207  206
              Fly   152  151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPM1NP_002511.1 Required for interaction with SENP3 1..186 46/173 (27%)
Necessary for interaction with APEX1. /evidence=ECO:0000269|PubMed:19188445 1..117 33/104 (32%)
Nucleoplasmin 18..117 CDD:460792 33/104 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..247 18/87 (21%)
Nuclear localization signal. /evidence=ECO:0000255 152..157 0/4 (0%)
Interaction with NOP2. /evidence=ECO:0000269|PubMed:8089149 187..215 5/20 (25%)
Nuclear localization signal. /evidence=ECO:0000255 191..197 0/5 (0%)
Required for nucleolar localization 243..294
NPM1-C 245..293 CDD:465081
NlpNP_524557.1 Nucleoplasmin 6..105 CDD:460792 33/117 (28%)
Blue background indicates that the domain is not in the aligned region.

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