DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act87E and ARP8

DIOPT Version :9

Sequence 1:NP_001287314.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_014784.1 Gene:ARP8 / 854309 SGDID:S000005667 Length:881 Species:Saccharomyces cerevisiae


Alignment Length:621 Identity:114/621 - (18%)
Similarity:202/621 - (32%) Gaps:254/621 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR--------------------------- 40
            :|..|.:|:..||...|.||..||.| .|.|:.|..|:                           
Yeast   263 NDPTATIVIHPGSNSIKIGFPKDDHP-VVVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNI 326

  Fly    41 -----------------------HQGVMVGMGQK--------------------DS--YVGDEA- 59
                                   |:.| |...:.                    ||  |.|.:| 
Yeast   327 KSEMEKNFRERMRYYKRKVPGNAHEQV-VSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDAL 390

  Fly    60 -----------QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAP---EEHPVLLTEA 109
                       ..:.|...:|.|....:.....|:.|:..|...:| |.|.|   .::.|:|...
Yeast   391 RCVDEKFVIRKPFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIP 455

  Fly   110 PLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG-RTTGIVLDSGDGVSHTVPIYEGYALP 173
            .:..|::.|...:::.......|:.:..:::.:.|.:| .|:..|::.|...:....:.||..|.
Yeast   456 DIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLE 520

  Fly   174 HAILRLDLAGRDLT----------DYLM---KILTERGY--------SFTTTAEREIVRDI---- 213
            |:.:.||..|.|:|          |:.:   ||.::.|:        :|||..:.::...:    
Yeast   521 HSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQLYNFM 585

  Fly   214 -------KEK----------LCYVALDFEQEM----ATAAASTSLEKSYELPDGQVITIGNE--- 254
                   .||          |..:||.|.|..    .::..::|||  ::||:.:.: ..||   
Yeast   586 NRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLE--FQLPESRDL-FTNELND 647

  Fly   255 -----RFRCPE-----------------------------------SLFQPSFLGMESCGIHETV 279
                 :|...|                                   :..:.:|..:|. .|.:::
Yeast   648 WNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEK-AIVQSI 711

  Fly   280 YNSIMKCDVDIRKDLYANIVMSGGTTMYPG----IADR--------------------MQKEITA 320
            .|:.:..||......|:||::.||::..|.    :.||                    :.|||..
Yeast   712 ANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKD 776

  Fly   321 L------AP------------STIKIKI------------------------IAPPERKYS---- 339
            |      ||            :.||.||                        |.||.|..:    
Yeast   777 LEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALI 841

  Fly   340 VWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            :|.|.|:||.:...::::|:..::|..|..|:..||
Yeast   842 IWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKC 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_001287314.1 PTZ00281 1..376 CDD:173506 114/621 (18%)
ARP8NP_014784.1 NBD_sugar-kinase_HSP70_actin 42..>447 CDD:418402 33/185 (18%)
ACTIN 266..878 CDD:214592 113/618 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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